[gentoo-commits] gentoo-x86 commit in sci-biology/abyss: ChangeLog abyss-1.2.7.ebuild abyss-1.2.0.ebuild

[Kacper Kowalik (xarthisius)]

xarthisius    11/04/28 14:04:23

  Modified:             ChangeLog
  Added:                abyss-1.2.7.ebuild
  Removed:              abyss-1.2.0.ebuild
  Log:
  Version bump. Remove -Werror wrt #365195 by Diego Elio Pettenò <flameeyes@g.o>. Fix doc paths. Drop old.
  
  (Portage version: 2.2.0_alpha30/cvs/Linux x86_64)

Revision  Changes    Path
1.9                  sci-biology/abyss/ChangeLog

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/abyss/ChangeLog?rev=1.9&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/abyss/ChangeLog?rev=1.9&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/abyss/ChangeLog?r1=1.8&r2=1.9

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/abyss/ChangeLog,v
retrieving revision 1.8
retrieving revision 1.9
diff -u -r1.8 -r1.9
--- ChangeLog	11 Feb 2011 13:04:19 -0000	1.8
+++ ChangeLog	28 Apr 2011 14:04:23 -0000	1.9
@@ -1,6 +1,13 @@
 # ChangeLog for sci-biology/abyss
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/abyss/ChangeLog,v 1.8 2011/02/11 13:04:19 hwoarang Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/abyss/ChangeLog,v 1.9 2011/04/28 14:04:23 xarthisius Exp $
+
+*abyss-1.2.7 (28 Apr 2011)
+
+  28 Apr 2011; Kacper Kowalik <xarthisius@g.o> -abyss-1.2.0.ebuild,
+  +abyss-1.2.7.ebuild:
+  Version bump. Remove -Werror wrt #365195 by Diego Elio Pettenò
+  <flameeyes@g.o>. Fix doc paths. Drop old.
 
   11 Feb 2011; Markos Chandras <hwoarang@g.o> abyss-1.2.3.ebuild:
   Stable on amd64 wrt bug #335370



1.1                  sci-biology/abyss/abyss-1.2.7.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/abyss/abyss-1.2.7.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/abyss/abyss-1.2.7.ebuild?rev=1.1&content-type=text/plain

Index: abyss-1.2.7.ebuild
===================================================================
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/abyss/abyss-1.2.7.ebuild,v 1.1 2011/04/28 14:04:23 xarthisius Exp $

EAPI="2"

inherit autotools base

DESCRIPTION="Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler"
HOMEPAGE="http://www.bcgsc.ca/platform/bioinfo/software/abyss"
SRC_URI="http://www.bcgsc.ca/downloads/abyss/${P}.tar.gz"

LICENSE="abyss"
SLOT="0"
IUSE="+mpi"
KEYWORDS="~amd64 ~x86"

DEPEND="dev-cpp/sparsehash
	mpi? ( virtual/mpi )"
RDEPEND="${DEPEND}"

DOCS=( ChangeLog README )

# todo: --enable-maxk=N configure option
# todo: fix automagic mpi toggling

src_prepare() {
	sed -i -e "s/-Werror//" configure.ac || die #365195
	sed -i -e "/dist_pkgdoc_DATA/d" Makefile.am || die
	eautoreconf
}