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commit: f6c7d5c837dda8298c255130f35c513a19934f5a |
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Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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AuthorDate: Fri Jun 30 16:51:37 2017 +0000 |
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Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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CommitDate: Fri Jul 28 20:05:08 2017 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=f6c7d5c8 |
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|
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sci-biology/KING: new package |
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|
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Package-Manager: Portage-2.3.5, Repoman-2.3.2 |
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|
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sci-biology/KING/KING-20161017.ebuild | 33 +++++++++++++++++++++++++++++++++ |
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sci-biology/KING/metadata.xml | 12 ++++++++++++ |
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2 files changed, 45 insertions(+) |
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|
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diff --git a/sci-biology/KING/KING-20161017.ebuild b/sci-biology/KING/KING-20161017.ebuild |
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new file mode 100644 |
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index 000000000..95ba91702 |
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--- /dev/null |
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+++ b/sci-biology/KING/KING-20161017.ebuild |
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@@ -0,0 +1,33 @@ |
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+# Copyright 1999-2017 Gentoo Foundation |
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+# Distributed under the terms of the GNU General Public License v2 |
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+ |
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+EAPI=6 |
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+ |
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+inherit eutils toolchain-funcs |
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+ |
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+DESCRIPTION="Check family relationship and infer population structure" |
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+HOMEPAGE="http://people.virginia.edu/~wc9c/KING |
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+ http://people.virginia.edu/~wc9c/publications/pdf/BI26_2867.pdf" |
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+SRC_URI="http://people.virginia.edu/~wc9c/KING/KINGcode.tar.gz -> ${P}.tar.gz |
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+ http://people.virginia.edu/~wc9c/KING/manual.html -> ${PN}_relationship_inference.html |
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+ http://people.virginia.edu/~wc9c/KING/kingpopulation.html -> ${PN}.kingpopulation.html" |
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+ |
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+LICENSE="all-rights-reserved" # Our robust relationship inference algorithm is implemented in a freely available software package |
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+SLOT="0" |
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+KEYWORDS="~amd64 ~x86" |
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+IUSE="" |
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+ |
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+DEPEND="" |
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+RDEPEND="${DEPEND}" |
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+ |
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+S="${WORKDIR}" |
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+ |
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+src_compile(){ |
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+ $(tc-getCXX) ${CXXFLAGS} -lm -lz -fopenmp -o king *.cpp |
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+} |
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+ |
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+src_install(){ |
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+ newbin {king,KING} |
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+ insinto /usr/share/doc/"${PN}" |
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+ dodoc "${DISTDIR}"/"${PN}"_relationship_inference.html "${DISTDIR}"/"${PN}".kingpopulation.html |
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+} |
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|
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diff --git a/sci-biology/KING/metadata.xml b/sci-biology/KING/metadata.xml |
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new file mode 100644 |
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index 000000000..f68a1b6fa |
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--- /dev/null |
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+++ b/sci-biology/KING/metadata.xml |
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@@ -0,0 +1,12 @@ |
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+<?xml version="1.0" encoding="UTF-8"?> |
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+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
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+<pkgmetadata> |
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+ <maintainer type="person"> |
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+ <email>mmokrejs@×××××××××××××××.cz</email> |
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+ <name>Martin Mokrejs</name> |
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+ </maintainer> |
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+ <maintainer type="project"> |
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+ <email>sci-biology@g.o</email> |
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+ <name>Gentoo Biology Project</name> |
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+ </maintainer> |
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+</pkgmetadata> |
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