[gentoo-commits] proj/sci:master commit in: sci-biology/fsa/

[Martin Mokrejs]

commit:     65cbf3d51c23c49ac206a0b38f0f94b0a2546d56
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Fri Jul  1 12:32:51 2016 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Fri Jul  1 12:32:51 2016 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=65cbf3d5

sci-biology/fsa: fix license, document optional packages, add DEPEND on java-config

Package-Manager: portage-2.2.28

 sci-biology/fsa/fsa-1.15.9.ebuild | 18 ++++++++++++++++--
 1 file changed, 16 insertions(+), 2 deletions(-)

diff --git a/sci-biology/fsa/fsa-1.15.9.ebuild b/sci-biology/fsa/fsa-1.15.9.ebuild
index 879a1c0..d37d56b 100644
--- a/sci-biology/fsa/fsa-1.15.9.ebuild
+++ b/sci-biology/fsa/fsa-1.15.9.ebuild
@@ -10,10 +10,24 @@ DESCRIPTION="Distance-based probabilistic multiple sequence alignment algo for D
 HOMEPAGE="http://fsa.sourceforge.net"
 SRC_URI="http://downloads.sourceforge.net/project/fsa/"${P}".tar.gz"
 
-LICENSE="GPL-2"
+LICENSE="GPL-3+"
 SLOT="0"
 KEYWORDS=""
 IUSE=""
 
-DEPEND=""
+DEPEND="dev-java/java-config"
 RDEPEND="${DEPEND}"
+
+# needs java for fsa-1.15.9/display/ processing:
+# jar cmf mad/manifest.mf mad.jar \
+#         -C . mad \
+#         -C . JMF-2.1.1e/lib/jmf.jar \
+#         -C . jai-1_1_3/lib/jai_core.jar \
+#         -C . jai-1_1_3/lib/jai_codec.jar
+# * Home for VM '' does not exist: 
+# * Invalid System VM: 
+
+pkg_postinst(){
+	einfo "Optionally you may want to install sci-biology/mummer and"
+	einfo "sci-biology/exonerate"
+}