[gentoo-commits] repo/gentoo:master commit in: sci-biology/paml/

[David Seifert]

commit:     5e71680b7a85431b46e92a2bb86e9f0507fcee3e
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Sun Nov  1 18:35:56 2020 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sun Nov  1 18:35:56 2020 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5e71680b

sci-biology/paml: Remove old 4.4c-r1

Closes: https://bugs.gentoo.org/706708
Package-Manager: Portage-3.0.8, Repoman-3.0.2
Signed-off-by: David Seifert <soap <AT> gentoo.org>

 sci-biology/paml/Manifest            |  1 -
 sci-biology/paml/paml-4.4c-r1.ebuild | 47 ------------------------------------
 2 files changed, 48 deletions(-)

diff --git a/sci-biology/paml/Manifest b/sci-biology/paml/Manifest
index e0bf2de6171..87d673016fb 100644
--- a/sci-biology/paml/Manifest
+++ b/sci-biology/paml/Manifest
@@ -1,2 +1 @@
-DIST paml4.4c.tar.gz 2891715 BLAKE2B 04449b80e4fec080eabb69108d399a32278fcc79221e3c0d087ad1d978517ae2655bce8c300260dfb99d4d60700369ec338fa71c1d48f41a82017dbd3cae2397 SHA512 6a5f6d5baa91afa924ea392b76e59db6691fa9d6ee13a248dfe6e46d3fc83178ce41c2991de1c4cdb21952ee53771298aa0c62060f47d0dd84eaa76eb533498a
 DIST paml4.9j.tgz 6380272 BLAKE2B 58fc40904aff6ae539613e772fc0525b557c1e72c1a7a1d95176987bafed8771624ae6c53803bc71c5821a52de8212a49ad99c02c408870ec929c15b6bf217e0 SHA512 c5f3c42409bbaf5ac67c816a245f1d3175ee449dcf10232d9de539130341f80f85ae53518cbca549b1f42ddf64a6e8140a22b9da091d458b425512f11f8c1758

diff --git a/sci-biology/paml/paml-4.4c-r1.ebuild b/sci-biology/paml/paml-4.4c-r1.ebuild
deleted file mode 100644
index 27fe5ed4c76..00000000000
--- a/sci-biology/paml/paml-4.4c-r1.ebuild
+++ /dev/null
@@ -1,47 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit toolchain-funcs versionator
-
-MY_P=$(version_format_string '${PN}$1$2')
-
-DESCRIPTION="Phylogenetic Analysis by Maximum Likelihood"
-HOMEPAGE="http://abacus.gene.ucl.ac.uk/software/paml.html"
-SRC_URI="http://abacus.gene.ucl.ac.uk/software/${PN}${PV}.tar.gz"
-
-LICENSE="free-noncomm"
-SLOT="0"
-KEYWORDS="amd64 x86"
-IUSE=""
-
-S=${WORKDIR}/${MY_P}
-
-src_prepare() {
-	# Notice send by mail to prof. Ziheng Yang
-	sed -i "s/\$(CC)/& \$(LDFLAGS)/" src/Makefile || die #335608
-}
-
-src_compile() {
-	emake -C src \
-		CC="$(tc-getCC)" \
-		CFLAGS="${CFLAGS} -Wno-unused-result" \
-		LDFLAGS="${LDFLAGS}"
-}
-
-src_install() {
-	dodoc README.txt doc/*
-
-	insinto /usr/share/${PN}/control
-	doins *.ctl
-
-	insinto /usr/share/${PN}/dat
-	doins stewart* *.dat dat/*
-
-	insinto /usr/share/${PN}
-	doins -r examples/
-
-	cd src || die
-	dobin baseml codeml basemlg mcmctree pamp evolver yn00 chi2
-}