Gentoo Archives: gentoo-commits

From: Martin Mokrejs <mmokrejs@×××××××××××××××.cz>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/biobambam2/
Date: Tue, 22 Jan 2019 15:35:20
Message-Id: 1548171305.c136ed4c31ad6688ff68b7f14c8b56f5f8d2504c.mmokrejs@gentoo
1 commit: c136ed4c31ad6688ff68b7f14c8b56f5f8d2504c
2 Author: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
3 AuthorDate: Tue Jan 22 15:35:05 2019 +0000
4 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
5 CommitDate: Tue Jan 22 15:35:05 2019 +0000
6 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=c136ed4c
7
8 sci-biology/biobambam2: upstream moved from github to gitlab
9
10 Package-Manager: Portage-2.3.56, Repoman-2.3.12
11 Signed-off-by: Martin Mokrejs <mmokrejs <AT> fold.natur.cuni.cz>
12
13 sci-biology/biobambam2/biobambam2-2.0.89.ebuild | 5 +++--
14 sci-biology/biobambam2/biobambam2-9999.ebuild | 11 ++++++-----
15 2 files changed, 9 insertions(+), 7 deletions(-)
16
17 diff --git a/sci-biology/biobambam2/biobambam2-2.0.89.ebuild b/sci-biology/biobambam2/biobambam2-2.0.89.ebuild
18 index f4d9679eb..3ebc9cae5 100644
19 --- a/sci-biology/biobambam2/biobambam2-2.0.89.ebuild
20 +++ b/sci-biology/biobambam2/biobambam2-2.0.89.ebuild
21 @@ -1,4 +1,4 @@
22 -# Copyright 1999-2018 Gentoo Authors
23 +# Copyright 1999-2019 Gentoo Authors
24 # Distributed under the terms of the GNU General Public License v2
25
26 EAPI=7
27 @@ -6,7 +6,8 @@ EAPI=7
28 inherit autotools
29
30 DESCRIPTION="Tools for bam file processing (libmaus2)"
31 -HOMEPAGE="https://github.com/gt1/biobambam2"
32 +HOMEPAGE="https://gitlab.com/german.tischler/biobambam2
33 + https://github.com/gt1/biobambam2"
34 SRC_URI="https://github.com/gt1/biobambam2/archive/2.0.89-release-20180518145034.tar.gz"
35
36 LICENSE="GPL-3 MIT"
37
38 diff --git a/sci-biology/biobambam2/biobambam2-9999.ebuild b/sci-biology/biobambam2/biobambam2-9999.ebuild
39 index e2fc6946a..59774ca56 100644
40 --- a/sci-biology/biobambam2/biobambam2-9999.ebuild
41 +++ b/sci-biology/biobambam2/biobambam2-9999.ebuild
42 @@ -1,13 +1,14 @@
43 -# Copyright 1999-2018 Gentoo Authors
44 +# Copyright 1999-2019 Gentoo Authors
45 # Distributed under the terms of the GNU General Public License v2
46
47 EAPI=7
48
49 inherit git-r3 autotools
50
51 -DESCRIPTION="Tools for bam file processing (libmaus2)"
52 -HOMEPAGE="https://github.com/gt1/biobambam2"
53 -EGIT_REPO_URI="https://github.com/gt1/biobambam2.git"
54 +DESCRIPTION="Tools for bam file processing (using libmaus2)"
55 +HOMEPAGE="https://gitlab.com/german.tischler/biobambam2
56 + https://github.com/gt1/biobambam2"
57 +EGIT_REPO_URI="https://gitlab.com/german.tischler/biobambam2"
58
59 LICENSE="GPL-3 MIT"
60 SLOT="0"
61 @@ -16,7 +17,7 @@ IUSE=""
62
63 DEPEND="
64 !sci-biology/biobambam
65 - >=sci-libs/libmaus2-2.0.225"
66 + >=sci-libs/libmaus2-2.0.555"
67 RDEPEND="${DEPEND}"
68
69 src_prepare() {