[gentoo-commits] proj/sci:master commit in: sci-biology/skewer-bin/

[Martin Mokrejs]

commit:     11b15cf806fb81c066602094002587160af5cf67
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sun Mar 23 19:41:54 2014 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Sun Mar 23 19:41:54 2014 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=11b15cf8

sci-biology/skewer-bin: new package

Package-Manager: portage-2.2.7

---
 sci-biology/skewer-bin/ChangeLog                 |  9 +++++++++
 sci-biology/skewer-bin/metadata.xml              |  9 +++++++++
 sci-biology/skewer-bin/skewer-bin-0.1.104.ebuild | 25 ++++++++++++++++++++++++
 3 files changed, 43 insertions(+)

diff --git a/sci-biology/skewer-bin/ChangeLog b/sci-biology/skewer-bin/ChangeLog
new file mode 100644
index 0000000..a00543c
--- /dev/null
+++ b/sci-biology/skewer-bin/ChangeLog
@@ -0,0 +1,9 @@
+# ChangeLog for sci-biology/skewer-bin
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*skewer-bin-0.1.104 (23 Mar 2014)
+
+  23 Mar 2014; Martin Mokrejs <mmokrejs@×××××××××××××××.cz> +metadata.xml,
+  +skewer-bin-0.1.104.ebuild:
+  sci-biology/skewer-bin: new package

diff --git a/sci-biology/skewer-bin/metadata.xml b/sci-biology/skewer-bin/metadata.xml
new file mode 100644
index 0000000..2bc8930
--- /dev/null
+++ b/sci-biology/skewer-bin/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <herd>sci-biology</herd>
+  <maintainer>
+    <email>mmokrejs@×××××××××××××××.cz</email>
+    <name>Martin Mokrejs</name>
+  </maintainer>
+</pkgmetadata>

diff --git a/sci-biology/skewer-bin/skewer-bin-0.1.104.ebuild b/sci-biology/skewer-bin/skewer-bin-0.1.104.ebuild
new file mode 100644
index 0000000..23afc2e
--- /dev/null
+++ b/sci-biology/skewer-bin/skewer-bin-0.1.104.ebuild
@@ -0,0 +1,25 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=3
+
+DESCRIPTION="Adaptor and MID removal / trimming tool, also for Illumina-oriented paired-end reads"
+HOMEPAGE="http://sourceforge.net/projects/skewer"
+SRC_URI="http://sourceforge.net/projects/skewer/files/Binaries/skewer-0.1.104-linux-x86_64
+		http://sourceforge.net/projects/skewer/files/Scripts/srna-scripts-0.1.2.tar.gz"
+
+LICENSE="Artistic"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE=""
+
+DEPEND=""
+RDEPEND="${DEPEND}
+	dev-lang/perl"
+
+src_install() {
+	cp "${DISTDIR}"/skewer-* skewer || die
+	dobin *.pl || die
+	dobin skewer || die "Failed to install clview binary"
+}