Gentoo Archives: gentoo-commits

From: "Samuli Suominen (ssuominen)" <ssuominen@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] gentoo-x86 commit in sci-biology/amos: ChangeLog amos-2.0.8.ebuild
Date: Thu, 30 Jul 2009 16:49:37
Message-Id: E1MWYow-00021C-Q6@stork.gentoo.org
1 ssuominen 09/07/30 16:49:34
2
3 Modified: ChangeLog amos-2.0.8.ebuild
4 Log:
5 Fix building with GCC 4.4 and GLIBC 2.10+ wrt #279572.
6 (Portage version: 2.2_rc33/cvs/Linux x86_64)
7
8 Revision Changes Path
9 1.5 sci-biology/amos/ChangeLog
10
11 file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/amos/ChangeLog?rev=1.5&view=markup
12 plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/amos/ChangeLog?rev=1.5&content-type=text/plain
13 diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/amos/ChangeLog?r1=1.4&r2=1.5
14
15 Index: ChangeLog
16 ===================================================================
17 RCS file: /var/cvsroot/gentoo-x86/sci-biology/amos/ChangeLog,v
18 retrieving revision 1.4
19 retrieving revision 1.5
20 diff -u -r1.4 -r1.5
21 --- ChangeLog 15 Mar 2009 17:58:50 -0000 1.4
22 +++ ChangeLog 30 Jul 2009 16:49:34 -0000 1.5
23 @@ -1,6 +1,10 @@
24 # ChangeLog for sci-biology/amos
25 # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
26 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/amos/ChangeLog,v 1.4 2009/03/15 17:58:50 maekke Exp $
27 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/amos/ChangeLog,v 1.5 2009/07/30 16:49:34 ssuominen Exp $
28 +
29 + 30 Jul 2009; Samuli Suominen <ssuominen@g.o> amos-2.0.8.ebuild,
30 + +files/amos-2.0.8-gcc44.patch:
31 + Fix building with GCC 4.4 and GLIBC 2.10+ wrt #279572.
32
33 15 Mar 2009; Markus Meier <maekke@g.o> amos-2.0.8.ebuild:
34 amd64/x86 stable, bug #261786
35
36
37
38 1.3 sci-biology/amos/amos-2.0.8.ebuild
39
40 file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/amos/amos-2.0.8.ebuild?rev=1.3&view=markup
41 plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/amos/amos-2.0.8.ebuild?rev=1.3&content-type=text/plain
42 diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/amos/amos-2.0.8.ebuild?r1=1.2&r2=1.3
43
44 Index: amos-2.0.8.ebuild
45 ===================================================================
46 RCS file: /var/cvsroot/gentoo-x86/sci-biology/amos/amos-2.0.8.ebuild,v
47 retrieving revision 1.2
48 retrieving revision 1.3
49 diff -u -r1.2 -r1.3
50 --- amos-2.0.8.ebuild 15 Mar 2009 17:58:50 -0000 1.2
51 +++ amos-2.0.8.ebuild 30 Jul 2009 16:49:34 -0000 1.3
52 @@ -1,9 +1,9 @@
53 # Copyright 1999-2009 Gentoo Foundation
54 # Distributed under the terms of the GNU General Public License v2
55 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/amos/amos-2.0.8.ebuild,v 1.2 2009/03/15 17:58:50 maekke Exp $
56 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/amos/amos-2.0.8.ebuild,v 1.3 2009/07/30 16:49:34 ssuominen Exp $
57
58 -EAPI="1"
59 -inherit qt3 eutils
60 +EAPI=2
61 +inherit eutils qt3
62
63 DESCRIPTION="A Modular, Open-Source whole genome assembler"
64 HOMEPAGE="http://amos.sourceforge.net/"
65 @@ -19,12 +19,14 @@
66 dev-perl/DBI
67 sci-biology/mummer"
68
69 +src_prepare() {
70 + epatch "${FILESDIR}"/${P}-gcc44.patch
71 +}
72 +
73 src_compile() {
74 - econf || die "econf failed"
75 - # TODO: fix parallel make. Notified upstream
76 emake -j1 || die "emake failed"
77 }
78
79 src_install() {
80 - emake DESTDIR="${D}" install || die "install failed"
81 + emake DESTDIR="${D}" install || die "emake install failed"
82 }