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commit: ca73ecf31bb85b7a3a976df75fbdbec29627ff12 |
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Author: Horea Christian <chr <AT> chymera <DOT> eu> |
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AuthorDate: Thu Apr 2 04:10:47 2020 +0000 |
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Commit: Horea Christian <horea.christ <AT> gmail <DOT> com> |
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CommitDate: Thu Apr 2 04:10:47 2020 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=ca73ecf3 |
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|
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sci-biology/bruker2nifti: new package |
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|
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Python Bruker ParaVision to NIfTI converter |
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|
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Package-Manager: Portage-2.3.96, Repoman-2.3.22 |
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Signed-off-by: Horea Christian <chr <AT> chymera.eu> |
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|
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sci-biology/bruker2nifti/bruker2nifti-1.0.4.ebuild | 31 ++++++++++++++++++++++ |
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sci-biology/bruker2nifti/metadata.xml | 16 +++++++++++ |
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2 files changed, 47 insertions(+) |
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|
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diff --git a/sci-biology/bruker2nifti/bruker2nifti-1.0.4.ebuild b/sci-biology/bruker2nifti/bruker2nifti-1.0.4.ebuild |
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new file mode 100644 |
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index 000000000..2297139a2 |
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--- /dev/null |
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+++ b/sci-biology/bruker2nifti/bruker2nifti-1.0.4.ebuild |
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@@ -0,0 +1,31 @@ |
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+# Copyright 1999-2020 Gentoo Authors |
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+# Distributed under the terms of the GNU General Public License v2 |
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+ |
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+EAPI=7 |
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+ |
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+PYTHON_COMPAT=( python3_{6,7} ) |
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+ |
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+inherit distutils-r1 |
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+ |
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+DESCRIPTION="Medical image converter, from raw Bruker ParaVision to NIfTI" |
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+HOMEPAGE="https://github.com/SebastianoF/bruker2nifti" |
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+SRC_URI="https://github.com/SebastianoF/bruker2nifti/archive/v${PV}.tar.gz -> ${P}.tar.gz" |
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+ |
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+LICENSE="MIT" |
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+SLOT="0" |
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+KEYWORDS="~amd64" |
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+ |
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+RDEPEND=" |
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+ dev-python/numpy[${PYTHON_USEDEP}] |
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+ sci-libs/nibabel[${PYTHON_USEDEP}] |
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+ " |
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+ |
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+#S="${WORKDIR}/Bru2Nii-${PV}" |
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+ |
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+python_prepare_all() { |
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+ sed -i -e "s/packages=find_packages()/packages=find_packages(exclude=('test',))/g"\ |
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+ setup.py || die |
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+ distutils-r1_python_prepare_all |
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+} |
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+ |
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+distutils_enable_tests pytest |
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|
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diff --git a/sci-biology/bruker2nifti/metadata.xml b/sci-biology/bruker2nifti/metadata.xml |
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new file mode 100644 |
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index 000000000..d67826b4d |
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--- /dev/null |
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+++ b/sci-biology/bruker2nifti/metadata.xml |
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@@ -0,0 +1,16 @@ |
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+<?xml version="1.0" encoding="UTF-8"?> |
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+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
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+<pkgmetadata> |
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+ <maintainer type="project"> |
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+ <email>sci@g.o</email> |
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+ <name>Gentoo Science Project</name> |
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+ </maintainer> |
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+ <longdescription lang="en"> |
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+ Bruker2nifti is an open source medical image format converter from |
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+ raw Bruker ParaVision to NifTi, without any intermediate step through |
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+ the DICOM standard format. |
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+ </longdescription> |
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+ <upstream> |
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+ <remote-id type="github">SebastianoF/bruker2nifti</remote-id> |
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+ </upstream> |
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+</pkgmetadata> |
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