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From: "Justin Lecher (jlec)" <jlec@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] gentoo-x86 commit in sci-chemistry/pymol: ChangeLog pymol-1.5.0.2.ebuild pymol-1.5.0.1.ebuild
Date: Mon, 27 Feb 2012 22:53:18
Message-Id: 20120227225303.905F82004B@flycatcher.gentoo.org
1 jlec 12/02/27 22:53:03
2
3 Modified: ChangeLog pymol-1.5.0.1.ebuild
4 Added: pymol-1.5.0.2.ebuild
5 Log:
6 Version Bump
7
8 (Portage version: 2.2.0_alpha89/cvs/Linux x86_64)
9
10 Revision Changes Path
11 1.85 sci-chemistry/pymol/ChangeLog
12
13 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/ChangeLog?rev=1.85&view=markup
14 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/ChangeLog?rev=1.85&content-type=text/plain
15 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/ChangeLog?r1=1.84&r2=1.85
16
17 Index: ChangeLog
18 ===================================================================
19 RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v
20 retrieving revision 1.84
21 retrieving revision 1.85
22 diff -u -r1.84 -r1.85
23 --- ChangeLog 26 Feb 2012 06:10:49 -0000 1.84
24 +++ ChangeLog 27 Feb 2012 22:53:03 -0000 1.85
25 @@ -1,6 +1,12 @@
26 # ChangeLog for sci-chemistry/pymol
27 # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
28 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.84 2012/02/26 06:10:49 patrick Exp $
29 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.85 2012/02/27 22:53:03 jlec Exp $
30 +
31 +*pymol-1.5.0.2 (27 Feb 2012)
32 +
33 + 27 Feb 2012; Justin Lecher <jlec@g.o> pymol-1.5.0.1.ebuild,
34 + +pymol-1.5.0.2.ebuild:
35 + Version Bump
36
37 26 Feb 2012; Patrick Lauer <patrick@g.o> pymol-1.3.1_pre3925-r1.ebuild,
38 pymol-1.4.1.ebuild, pymol-1.5.0.1.ebuild:
39
40
41
42 1.4 sci-chemistry/pymol/pymol-1.5.0.1.ebuild
43
44 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/pymol-1.5.0.1.ebuild?rev=1.4&view=markup
45 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/pymol-1.5.0.1.ebuild?rev=1.4&content-type=text/plain
46 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/pymol-1.5.0.1.ebuild?r1=1.3&r2=1.4
47
48 Index: pymol-1.5.0.1.ebuild
49 ===================================================================
50 RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/pymol-1.5.0.1.ebuild,v
51 retrieving revision 1.3
52 retrieving revision 1.4
53 diff -u -r1.3 -r1.4
54 --- pymol-1.5.0.1.ebuild 26 Feb 2012 06:10:49 -0000 1.3
55 +++ pymol-1.5.0.1.ebuild 27 Feb 2012 22:53:03 -0000 1.4
56 @@ -1,6 +1,6 @@
57 # Copyright 1999-2012 Gentoo Foundation
58 # Distributed under the terms of the GNU General Public License v2
59 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/pymol-1.5.0.1.ebuild,v 1.3 2012/02/26 06:10:49 patrick Exp $
60 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/pymol-1.5.0.1.ebuild,v 1.4 2012/02/27 22:53:03 jlec Exp $
61
62 EAPI=4
63
64 @@ -104,7 +104,7 @@
65 dodoc DEVELOPERS README
66
67 doicon "${WORKDIR}"/${PN}.xpm
68 - make_desktop_entry pymol PyMol ${PN}.xpm "Graphics;Science;Chemistry"
69 + make_desktop_entry pymol PyMol ${PN} "Graphics;Science;Chemistry"
70 }
71
72 pkg_postinst() {
73
74
75
76 1.1 sci-chemistry/pymol/pymol-1.5.0.2.ebuild
77
78 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/pymol-1.5.0.2.ebuild?rev=1.1&view=markup
79 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/pymol-1.5.0.2.ebuild?rev=1.1&content-type=text/plain
80
81 Index: pymol-1.5.0.2.ebuild
82 ===================================================================
83 # Copyright 1999-2012 Gentoo Foundation
84 # Distributed under the terms of the GNU General Public License v2
85 # $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/pymol-1.5.0.2.ebuild,v 1.1 2012/02/27 22:53:03 jlec Exp $
86
87 EAPI=4
88
89 PYTHON_DEPEND="2:2.7"
90 SUPPORT_PYTHON_ABIS="1"
91 RESTRICT_PYTHON_ABIS="2.4 2.5 2.6 3.* *-jython 2.7-pypy-*"
92 PYTHON_USE_WITH="tk"
93 PYTHON_MODNAME="${PN} chempy pmg_tk pmg_wx"
94
95 inherit distutils eutils fdo-mime prefix versionator
96
97 DESCRIPTION="A Python-extensible molecular graphics system"
98 HOMEPAGE="http://pymol.sourceforge.net/"
99 SRC_URI="
100 http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz
101 http://dev.gentoo.org/~jlec/distfiles/${PN}.xpm.tar"
102
103 LICENSE="PSF-2.2"
104 SLOT="0"
105 KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux"
106 IUSE="apbs numpy vmd web"
107
108 DEPEND="
109 dev-python/numpy
110 dev-python/pmw
111 media-libs/freetype:2
112 media-libs/glew
113 media-libs/libpng
114 media-video/mpeg-tools
115 sys-libs/zlib
116 media-libs/freeglut
117 apbs? (
118 dev-libs/maloc
119 sci-chemistry/apbs
120 sci-chemistry/pdb2pqr
121 sci-chemistry/pymol-apbs-plugin
122 )
123 web? ( !dev-python/webpy )"
124 RDEPEND="${DEPEND}"
125
126 src_prepare() {
127 epatch \
128 "${FILESDIR}"/${PN}-1.5.0.1-setup.py.patch \
129 "${FILESDIR}"/${PN}-1.5.0.1-data-path.patch \
130 "${FILESDIR}"/${PN}-1.5.0.1-flags.patch
131
132 use web || epatch "${FILESDIR}"/${PN}-1.5.0.1-web.patch
133
134 epatch "${FILESDIR}"/${PN}-1.5.0.1-prefix.patch && \
135 eprefixify setup.py
136
137 use vmd && epatch "${FILESDIR}"/${PN}-1.5.0.1-vmd.patch
138
139 if use numpy; then
140 sed \
141 -e '/PYMOL_NUMPY/s:^#::g' \
142 -i setup.py || die
143 fi
144
145 rm ./modules/pmg_tk/startup/apbs_tools.py || die
146
147 echo "site_packages = \'$(python_get_sitedir -f)\'" > setup3.py || die
148
149 # python 3.* fix
150 # sed '452,465d' -i setup.py
151 distutils_src_prepare
152 }
153
154 src_configure() {
155 :
156 }
157
158 src_install() {
159 distutils_src_install
160
161 # These environment variables should not go in the wrapper script, or else
162 # it will be impossible to use the PyMOL libraries from Python.
163 cat >> "${T}"/20pymol <<- EOF
164 PYMOL_PATH="${EPREFIX}/$(python_get_sitedir -f)/${PN}"
165 PYMOL_DATA="${EPREFIX}/usr/share/pymol/data"
166 PYMOL_SCRIPTS="${EPREFIX}/usr/share/pymol/scripts"
167 EOF
168
169 doenvd "${T}"/20pymol
170
171 cat >> "${T}"/pymol <<- EOF
172 #!/bin/sh
173 $(PYTHON -f) -O \${PYMOL_PATH}/__init__.py -q \$*
174 EOF
175
176 dobin "${T}"/pymol
177
178 insinto /usr/share/pymol
179 doins -r test data scripts
180
181 insinto /usr/share/pymol/examples
182 doins -r examples
183
184 dodoc DEVELOPERS README
185
186 doicon "${WORKDIR}"/${PN}.xpm
187 make_desktop_entry pymol PyMol ${PN} "Graphics;Science;Chemistry"
188 }
189
190 pkg_postinst() {
191 elog "\t USE=shaders was removed,"
192 elog "please use pymol config settings"
193 elog "\t set use_shaders, 1"
194 distutils_pkg_postinst
195 fdo-mime_desktop_database_update
196 fdo-mime_mime_database_update
197 }
198
199 pkg_postrm() {
200 fdo-mime_desktop_database_update
201 fdo-mime_mime_database_update
202 }
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