[gentoo-commits] proj/sci:master commit in: sci-libs/pybids/

[Horea Christian]

commit:     c939a6bdec9371a7e75811188895ea2ed70a4d54
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Fri Jan 10 13:29:06 2020 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Fri Jan 10 13:29:06 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=c939a6bd

sci-libs/pybids: version bump 0.6.5

Package-Manager: Portage-2.3.84, Repoman-2.3.20
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/pybids/pybids-0.6.5.ebuild | 42 +++++++++++++++++++++++++++++++++++++
 1 file changed, 42 insertions(+)

diff --git a/sci-libs/pybids/pybids-0.6.5.ebuild b/sci-libs/pybids/pybids-0.6.5.ebuild
new file mode 100644
index 000000000..1a3e5aa5f
--- /dev/null
+++ b/sci-libs/pybids/pybids-0.6.5.ebuild
@@ -0,0 +1,42 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_6 )
+
+inherit distutils-r1
+
+DESCRIPTION="Python package to access BIDS datasets"
+HOMEPAGE="https://github.com/INCF/pybids"
+SRC_URI="https://github.com/INCF/pybids/archive/${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE=""
+
+DEPEND="
+	dev-python/setuptools[${PYTHON_USEDEP}]
+	"
+RDEPEND="
+	dev-python/grabbit[${PYTHON_USEDEP}]
+	dev-python/num2words[${PYTHON_USEDEP}]
+	dev-python/numpy[${PYTHON_USEDEP}]
+	dev-python/pandas[${PYTHON_USEDEP}]
+	dev-python/patsy[${PYTHON_USEDEP}]
+	dev-python/six[${PYTHON_USEDEP}]
+	sci-libs/nibabel[${PYTHON_USEDEP}]
+	sci-libs/scipy[${PYTHON_USEDEP}]
+	"
+
+RESTRICT="test"
+# Fails because fixtures are called directly
+# https://github.com/bids-standard/pybids/issues/289#issuecomment-476853673
+
+python_test() {
+	rm bids/tests/test_config.py || die
+	distutils_install_for_testing
+	pytest -vv || die
+	die
+}