[gentoo-commits] proj/sci:master commit in: sci-biology/jigsaw/

[Andrew Ammerlaan]

commit:     effb881f64d5b18a2b2d05e9a28f3d54f9a0b484
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Mon Feb  1 11:00:08 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Mon Feb  1 11:00:08 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=effb881f

sci-biology/jigsaw: define correct compile and install phases

compilation itself fails, this needs a patch

Package-Manager: Portage-3.0.14, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>

 sci-biology/jigsaw/jigsaw-3.2.10.ebuild  | 13 -------------
 sci-biology/jigsaw/jigsaw-3.2.10m.ebuild | 28 ++++++++++++++++++++++++++++
 2 files changed, 28 insertions(+), 13 deletions(-)

diff --git a/sci-biology/jigsaw/jigsaw-3.2.10.ebuild b/sci-biology/jigsaw/jigsaw-3.2.10.ebuild
deleted file mode 100644
index 47ef93f7f..000000000
--- a/sci-biology/jigsaw/jigsaw-3.2.10.ebuild
+++ /dev/null
@@ -1,13 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-DESCRIPTION="Combine results from external gene predictors into final gene models"
-HOMEPAGE="http://www.cbcb.umd.edu/software/jigsaw"
-SRC_URI="http://cbcb.umd.edu/software/jigsaw/${P}.tar.gz"
-
-LICENSE="Artistic"
-SLOT="0"
-KEYWORDS=""
-IUSE=""

diff --git a/sci-biology/jigsaw/jigsaw-3.2.10m.ebuild b/sci-biology/jigsaw/jigsaw-3.2.10m.ebuild
new file mode 100644
index 000000000..1a78ae08e
--- /dev/null
+++ b/sci-biology/jigsaw/jigsaw-3.2.10m.ebuild
@@ -0,0 +1,28 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+DESCRIPTION="Combine results from external gene predictors into final gene models"
+HOMEPAGE="https://www.cbcb.umd.edu/software/jigsaw"
+SRC_URI="https://www.cbcb.umd.edu/software/jigsaw/${P}.tar.gz"
+
+LICENSE="Artistic"
+SLOT="0"
+KEYWORDS=""
+
+S="${WORKDIR}/${PN}-${PV//m}"
+
+src_compile() {
+	cd src/main || die
+	emake
+	cd ../../lib/oc1
+	emake
+}
+
+src_install() {
+	cd src/main || die
+	emake DESTDIR="${ED}" install
+	cd ../../lib/oc1
+	emake DESTDIR="${ED}" install
+}