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From: "Justin Lecher (jlec)" <jlec@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] gentoo-x86 commit in sci-chemistry/apbs: apbs-1.3-r1.ebuild metadata.xml ChangeLog apbs-1.2.1b-r4.ebuild apbs-1.3.ebuild
Date: Sat, 02 Jul 2011 08:57:20
Message-Id: 20110702085656.28C0B2004B@flycatcher.gentoo.org
1 jlec 11/07/02 08:56:56
2
3 Modified: apbs-1.3-r1.ebuild metadata.xml ChangeLog
4 apbs-1.2.1b-r4.ebuild apbs-1.3.ebuild
5 Log:
6 Use pkg-config to detect mmdb and lapack libs
7
8 (Portage version: 2.2.0_alpha43/cvs/Linux x86_64)
9
10 Revision Changes Path
11 1.6 sci-chemistry/apbs/apbs-1.3-r1.ebuild
12
13 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.3-r1.ebuild?rev=1.6&view=markup
14 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.3-r1.ebuild?rev=1.6&content-type=text/plain
15 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.3-r1.ebuild?r1=1.5&r2=1.6
16
17 Index: apbs-1.3-r1.ebuild
18 ===================================================================
19 RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.3-r1.ebuild,v
20 retrieving revision 1.5
21 retrieving revision 1.6
22 diff -u -r1.5 -r1.6
23 --- apbs-1.3-r1.ebuild 21 Jun 2011 16:07:35 -0000 1.5
24 +++ apbs-1.3-r1.ebuild 2 Jul 2011 08:56:56 -0000 1.6
25 @@ -1,12 +1,12 @@
26 # Copyright 1999-2011 Gentoo Foundation
27 # Distributed under the terms of the GNU General Public License v2
28 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.3-r1.ebuild,v 1.5 2011/06/21 16:07:35 jlec Exp $
29 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.3-r1.ebuild,v 1.6 2011/07/02 08:56:56 jlec Exp $
30
31 EAPI="3"
32
33 PYTHON_DEPEND="python? 2"
34
35 -inherit autotools eutils fortran-2 flag-o-matic python toolchain-funcs versionator
36 +inherit autotools eutils flag-o-matic fortran-2 python toolchain-funcs versionator
37
38 MY_PV=$(get_version_component_range 1-3)
39 MY_P="${PN}-${MY_PV}"
40 @@ -108,7 +108,7 @@
41 econf \
42 --disable-maloc-rebuild \
43 --enable-shared \
44 - --with-blas=-lblas \
45 + --with-blas="$(pkg-config --libs blas)" \
46 $(use_enable openmp) \
47 $(use_enable python) \
48 $(use_enable tools) \
49
50
51
52 1.11 sci-chemistry/apbs/metadata.xml
53
54 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/metadata.xml?rev=1.11&view=markup
55 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/metadata.xml?rev=1.11&content-type=text/plain
56 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/metadata.xml?r1=1.10&r2=1.11
57
58 Index: metadata.xml
59 ===================================================================
60 RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/metadata.xml,v
61 retrieving revision 1.10
62 retrieving revision 1.11
63 diff -u -r1.10 -r1.11
64 --- metadata.xml 1 Nov 2010 17:25:22 -0000 1.10
65 +++ metadata.xml 2 Jul 2011 08:56:56 -0000 1.11
66 @@ -2,21 +2,21 @@
67 <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
68 <pkgmetadata>
69 <herd>sci-chemistry</herd>
70 - <maintainer>
71 - <email>markusle@g.o</email>
72 - <name>Markus Dittrich</name>
73 - </maintainer>
74 + <maintainer>
75 + <email>markusle@g.o</email>
76 + <name>Markus Dittrich</name>
77 + </maintainer>
78 <maintainer>
79 <email>jlec@g.o</email>
80 <name>Justin Lecher</name>
81 <description>Ebuild Crasher</description>
82 - </maintainer>
83 + </maintainer>
84 <use>
85 - <flag name='arpack'>Include support for arpack libs</flag>
86 - <flag name='fetk'>Include support for FeTK</flag>
87 - <flag name='tools'>Install optional tools</flag>
88 + <flag name="arpack">Include support for arpack libs</flag>
89 + <flag name="fetk">Include support for FeTK</flag>
90 + <flag name="tools">Install optional tools</flag>
91 </use>
92 -<longdescription>
93 + <longdescription>
94 APBS is a software package for modeling biomolecular solvation through solution
95 of the Poisson-Boltzmann equation (PBE), one of the most popular continuum
96 models for describing electrostatic interactions between molecular solutes in
97
98
99
100 1.49 sci-chemistry/apbs/ChangeLog
101
102 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/ChangeLog?rev=1.49&view=markup
103 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/ChangeLog?rev=1.49&content-type=text/plain
104 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/ChangeLog?r1=1.48&r2=1.49
105
106 Index: ChangeLog
107 ===================================================================
108 RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v
109 retrieving revision 1.48
110 retrieving revision 1.49
111 diff -u -r1.48 -r1.49
112 --- ChangeLog 21 Jun 2011 16:07:35 -0000 1.48
113 +++ ChangeLog 2 Jul 2011 08:56:56 -0000 1.49
114 @@ -1,6 +1,10 @@
115 # ChangeLog for sci-chemistry/apbs
116 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
117 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.48 2011/06/21 16:07:35 jlec Exp $
118 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.49 2011/07/02 08:56:56 jlec Exp $
119 +
120 + 02 Jul 2011; Justin Lecher <jlec@g.o> apbs-1.2.1b-r4.ebuild,
121 + apbs-1.3.ebuild, apbs-1.3-r1.ebuild, metadata.xml:
122 + Use pkg-config to detect mmdb and lapack libs
123
124 21 Jun 2011; Justin Lecher <jlec@g.o> apbs-1.2.1b-r4.ebuild,
125 apbs-1.3.ebuild, apbs-1.3-r1.ebuild:
126
127
128
129 1.12 sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild
130
131 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild?rev=1.12&view=markup
132 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild?rev=1.12&content-type=text/plain
133 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild?r1=1.11&r2=1.12
134
135 Index: apbs-1.2.1b-r4.ebuild
136 ===================================================================
137 RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild,v
138 retrieving revision 1.11
139 retrieving revision 1.12
140 diff -u -r1.11 -r1.12
141 --- apbs-1.2.1b-r4.ebuild 21 Jun 2011 16:07:35 -0000 1.11
142 +++ apbs-1.2.1b-r4.ebuild 2 Jul 2011 08:56:56 -0000 1.12
143 @@ -1,12 +1,12 @@
144 # Copyright 1999-2011 Gentoo Foundation
145 # Distributed under the terms of the GNU General Public License v2
146 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild,v 1.11 2011/06/21 16:07:35 jlec Exp $
147 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild,v 1.12 2011/07/02 08:56:56 jlec Exp $
148
149 EAPI="3"
150
151 PYTHON_DEPEND="python? 2"
152
153 -inherit autotools eutils fortran-2 flag-o-matic python toolchain-funcs versionator
154 +inherit autotools eutils flag-o-matic fortran-2 python toolchain-funcs versionator
155
156 MY_PV=$(get_version_component_range 1-3)
157 MY_P="${PN}-${MY_PV}"
158 @@ -80,7 +80,7 @@
159 econf \
160 --disable-maloc-rebuild \
161 --enable-shared \
162 - --with-blas=-lblas \
163 + --with-blas="$(pkg-config --libs blas)" \
164 $(use_enable openmp) \
165 $(use_enable python) \
166 $(use_enable tools) \
167
168
169
170 1.8 sci-chemistry/apbs/apbs-1.3.ebuild
171
172 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.3.ebuild?rev=1.8&view=markup
173 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.3.ebuild?rev=1.8&content-type=text/plain
174 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.3.ebuild?r1=1.7&r2=1.8
175
176 Index: apbs-1.3.ebuild
177 ===================================================================
178 RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.3.ebuild,v
179 retrieving revision 1.7
180 retrieving revision 1.8
181 diff -u -r1.7 -r1.8
182 --- apbs-1.3.ebuild 21 Jun 2011 16:07:35 -0000 1.7
183 +++ apbs-1.3.ebuild 2 Jul 2011 08:56:56 -0000 1.8
184 @@ -1,12 +1,12 @@
185 # Copyright 1999-2011 Gentoo Foundation
186 # Distributed under the terms of the GNU General Public License v2
187 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.3.ebuild,v 1.7 2011/06/21 16:07:35 jlec Exp $
188 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.3.ebuild,v 1.8 2011/07/02 08:56:56 jlec Exp $
189
190 EAPI="3"
191
192 PYTHON_DEPEND="python? 2"
193
194 -inherit autotools eutils fortran-2 flag-o-matic python toolchain-funcs versionator
195 +inherit autotools eutils flag-o-matic fortran-2 python toolchain-funcs versionator
196
197 MY_PV=$(get_version_component_range 1-3)
198 MY_P="${PN}-${MY_PV}"
199 @@ -105,7 +105,7 @@
200 econf \
201 --disable-maloc-rebuild \
202 --enable-shared \
203 - --with-blas=-lblas \
204 + --with-blas="$(pkg-config --libs blas)" \
205 $(use_enable openmp) \
206 $(use_enable python) \
207 $(use_enable tools) \
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