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commit: 9e0134a54a52511520a2adc08d58a9304d130294 |
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Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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AuthorDate: Sun Apr 3 17:47:49 2016 +0000 |
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Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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CommitDate: Sun Apr 3 17:47:49 2016 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=9e0134a5 |
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|
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sci-biology/prinseq-lite: new package, needs more perl modules |
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|
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Package-Manager: portage-2.2.28 |
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|
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sci-biology/prinseq-lite/metadata.xml | 12 ++++++++ |
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.../prinseq-lite/prinseq-lite-0.20.4.ebuild | 36 ++++++++++++++++++++++ |
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2 files changed, 48 insertions(+) |
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|
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diff --git a/sci-biology/prinseq-lite/metadata.xml b/sci-biology/prinseq-lite/metadata.xml |
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new file mode 100644 |
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index 0000000..f68a1b6 |
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--- /dev/null |
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+++ b/sci-biology/prinseq-lite/metadata.xml |
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@@ -0,0 +1,12 @@ |
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+<?xml version="1.0" encoding="UTF-8"?> |
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+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
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+<pkgmetadata> |
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+ <maintainer type="person"> |
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+ <email>mmokrejs@×××××××××××××××.cz</email> |
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+ <name>Martin Mokrejs</name> |
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+ </maintainer> |
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+ <maintainer type="project"> |
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+ <email>sci-biology@g.o</email> |
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+ <name>Gentoo Biology Project</name> |
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+ </maintainer> |
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+</pkgmetadata> |
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|
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diff --git a/sci-biology/prinseq-lite/prinseq-lite-0.20.4.ebuild b/sci-biology/prinseq-lite/prinseq-lite-0.20.4.ebuild |
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new file mode 100644 |
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index 0000000..b7ae2fb |
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--- /dev/null |
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+++ b/sci-biology/prinseq-lite/prinseq-lite-0.20.4.ebuild |
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@@ -0,0 +1,36 @@ |
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+# Copyright 1999-2016 Gentoo Foundation |
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+# Distributed under the terms of the GNU General Public License v2 |
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+# $Id$ |
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+ |
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+EAPI=6 |
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+ |
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+DESCRIPTION="Describe, trim, reformat and convert to or form FASTA/FASTQ files" |
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+HOMEPAGE="http://prinseq.sourceforge.net/" |
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+SRC_URI="https://sourceforge.net/projects/prinseq/files/standalone/${P}.tar.gz" |
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+ |
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+LICENSE="GPL-3+" |
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+SLOT="0" |
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+KEYWORDS="" |
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+IUSE="" |
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+ |
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+DEPEND="" |
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+RDEPEND="${DEPEND} |
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+ virtual/perl-Getopt-Long |
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+ virtual/perl-File-Temp |
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+ dev-perl/Digest-MD5-File" |
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+# Cwd |
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+# Pod::Usage |
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+# Fcntl qw(:flock SEEK_END) |
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+# List::Util qw(sum min max) |
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+ |
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+# prinseq-graphs.pl needs in addition |
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+# https://sourceforge.net/projects/prinseq/files/README.txt |
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+# JSON |
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+# Cairo |
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+# Statistics::PCA |
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+# perl-core/MIME-Base64 |
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+ |
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+src_install(){ |
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+ dobin *.pl |
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+ dodoc README |
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+} |