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commit: 5f3f4d9525b701b6643ecbdfa3835051201c6e25 |
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Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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AuthorDate: Thu Feb 16 09:53:34 2017 +0000 |
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Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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CommitDate: Thu Feb 16 09:53:34 2017 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=5f3f4d95 |
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|
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sci-biology/freebayes: force compilation in a single thread as parallel build fails |
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|
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Package-Manager: Portage-2.3.3, Repoman-2.3.1 |
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|
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sci-biology/freebayes/freebayes-9999.ebuild | 6 +++++- |
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1 file changed, 5 insertions(+), 1 deletion(-) |
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diff --git a/sci-biology/freebayes/freebayes-9999.ebuild b/sci-biology/freebayes/freebayes-9999.ebuild |
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index b4eee4419..1b1eb89ed 100644 |
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--- a/sci-biology/freebayes/freebayes-9999.ebuild |
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+++ b/sci-biology/freebayes/freebayes-9999.ebuild |
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@@ -1,4 +1,4 @@ |
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-# Copyright 1999-2016 Gentoo Foundation |
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+# Copyright 1999-2017 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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# $Id$ |
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|
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@@ -84,6 +84,10 @@ RDEPEND="${DEPEND} |
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|
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# g++ -O3 -D_FILE_OFFSET_BITS=64 -g -I../ttmath -I../bamtools/src/ -I../vcflib/src/ -I../vcflib/tabixpp/ -I../vcflib/smithwaterman/ -I../vcflib/multichoose/ -I../vcflib/filevercmp/ -I../vcflib/tabixpp/htslib -I../SeqLib -I../SeqLib/htslib -c freebayes.cpp |
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|
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+src_compile(){ |
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+ emake -j1 # vcflib/smithwaterman/ sometimes does not compile |
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+} |
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+ |
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src_install(){ |
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dobin bin/freebayes bin/bamleftalign |
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} |