[gentoo-commits] gentoo-x86 commit in sci-chemistry/psi/files: 3.4.0-dont-build-libint.patch 3.4.0-destdir.patch psi-3.4.0-parallel-make.patch 3.4.0-gcc-4.3.patch

[Justin Lecher (jlec)]

jlec        10/06/24 21:08:01

  Added:                3.4.0-dont-build-libint.patch 3.4.0-destdir.patch
                        psi-3.4.0-parallel-make.patch 3.4.0-gcc-4.3.patch
  Log:
  Version Bump, #279566
  (Portage version: 2.2_rc67/cvs/Linux x86_64)

Revision  Changes    Path
1.1                  sci-chemistry/psi/files/3.4.0-dont-build-libint.patch

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/files/3.4.0-dont-build-libint.patch?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/files/3.4.0-dont-build-libint.patch?rev=1.1&content-type=text/plain

Index: 3.4.0-dont-build-libint.patch
===================================================================
diff --git a/src/lib/Makefile.in b/src/lib/Makefile.in
index 42e025d..b098a36 100644
--- a/src/lib/Makefile.in
+++ b/src/lib/Makefile.in
@@ -2,7 +2,7 @@
 .PHONY:	default all install depend clean dclean targetclean
 
 subdirs = libipv1 libciomr libchkpt libqt libpsio libiwl libdpd libutil \
-          liboptions libmoinfo libint libderiv libr12 libbasis libmints
+          liboptions libmoinfo libbasis libmints
 
 all: default
 



1.1                  sci-chemistry/psi/files/3.4.0-destdir.patch

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/files/3.4.0-destdir.patch?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/files/3.4.0-destdir.patch?rev=1.1&content-type=text/plain

Index: 3.4.0-destdir.patch
===================================================================
diff --git a/Makefile.in b/Makefile.in
index aca5a16..2e49f0a 100644
--- a/Makefile.in
+++ b/Makefile.in
@@ -8,6 +8,7 @@ subdirs = lib include src
 
 top_srcdir = @top_srcdir@
 srcdir = @srcdir@
+datarootdir = @datarootdir@
 VPATH = @srcdir@
 top_objdir = .
 
diff --git a/lib/ruby/Makefile.in b/lib/ruby/Makefile.in
index b31ce7f..e099e1b 100644
--- a/lib/ruby/Makefile.in
+++ b/lib/ruby/Makefile.in
@@ -29,10 +29,10 @@ ccenergy.rb    cclambda.rb    chkpt.rb       color.rb       deriv2.rb      frequ
 cceom.rb       ccsort.rb      cints.rb       cphf.rb        detci.rb       input.rb       optking.rb     psi3.rb        testcases.rb 
 
 install: $(RUBYSRC)
-	$(MKDIRS) $(rubydatadir)
+	$(MKDIRS) $(DESTDIR)/$(rubydatadir)
 	for rbfile in $(RUBYSRC); \
           do \
-            ($(INSTALL_DATA) $(srcdir)/$${rbfile} $(rubydatadir)) || exit 1; \
+            ($(INSTALL_DATA) $(srcdir)/$${rbfile} $(DESTDIR)/$(rubydatadir)) || exit 1; \
           done
 
 install_man: 
diff --git a/src/bin/Makefile.in b/src/bin/Makefile.in
index e1abb46..4eddf8d 100644
--- a/src/bin/Makefile.in
+++ b/src/bin/Makefile.in
@@ -65,6 +65,7 @@ targetclean:
 
 top_srcdir = @top_srcdir@
 srcdir = @srcdir@
+datarootdir = @datarootdir@
 top_objdir = ../..
 
 $(top_srcdir)/configure: $(top_srcdir)/configure.ac $(top_srcdir)/aclocal.m4



1.1                  sci-chemistry/psi/files/psi-3.4.0-parallel-make.patch

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/files/psi-3.4.0-parallel-make.patch?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/files/psi-3.4.0-parallel-make.patch?rev=1.1&content-type=text/plain

Index: psi-3.4.0-parallel-make.patch
===================================================================
diff --git a/src/lib/libipv1/Makefile.in b/src/lib/libipv1/Makefile.in
index eafe8e2..141bf3b 100644
--- a/src/lib/libipv1/Makefile.in
+++ b/src/lib/libipv1/Makefile.in
@@ -33,10 +33,12 @@ LIBOBJ = $(ALLCSRC:%.c=%.o) $(ALLCXXSRC:%.cc=%.o)
 
 include ../MakeRules
 
-y.tab.c y.tab.h: parse.y
+y.tab.h: y.tab.c
+
+y.tab.c: parse.y
 	$(YACC) -v -d $<
 
-scan.c: scan.l
+scan.c: scan.l y.tab.h
 	$(LEX) -t $^ > scan.c
 
 install_inc:: $(ALLINCLUDE)



1.1                  sci-chemistry/psi/files/3.4.0-gcc-4.3.patch

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/files/3.4.0-gcc-4.3.patch?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/files/3.4.0-gcc-4.3.patch?rev=1.1&content-type=text/plain

Index: 3.4.0-gcc-4.3.patch
===================================================================
diff --git a/src/bin/mcscf/block_matrix.cc b/src/bin/mcscf/block_matrix.cc
index fe1e131..3ad0bcd 100644
--- a/src/bin/mcscf/block_matrix.cc
+++ b/src/bin/mcscf/block_matrix.cc
@@ -1,6 +1,7 @@
 #include "block_matrix.h"
 #include "matrix_base.h"
 #include "memory_manager.h"
+#include <cstdio>
 
 extern FILE* outfile;
 
diff --git a/src/bin/mcscf/block_vector.cc b/src/bin/mcscf/block_vector.cc
index fb383c7..36f55d4 100644
--- a/src/bin/mcscf/block_vector.cc
+++ b/src/bin/mcscf/block_vector.cc
@@ -1,6 +1,7 @@
 #include "block_vector.h"
 #include "vector_base.h"
 #include "memory_manager.h"
+#include <cstdio>
 
 extern FILE* outfile;
 
diff --git a/src/bin/mcscf/sblock_matrix.cc b/src/bin/mcscf/sblock_matrix.cc
index 61aa7cc..4da4263 100644
--- a/src/bin/mcscf/sblock_matrix.cc
+++ b/src/bin/mcscf/sblock_matrix.cc
@@ -1,4 +1,5 @@
 #include <cstdlib>
+#include <cstdio>
 #include <psifiles.h>
 #include "sblock_matrix.h"
 
@@ -103,4 +104,4 @@ void SBlockMatrix::check(const char* cstr)
   }
 }
 
-}}
\ No newline at end of file
+}}
diff --git a/src/bin/mcscf/sblock_vector.cc b/src/bin/mcscf/sblock_vector.cc
index 63c3926..f24fc5b 100644
--- a/src/bin/mcscf/sblock_vector.cc
+++ b/src/bin/mcscf/sblock_vector.cc
@@ -1,4 +1,5 @@
 #include <cstdlib>
+#include <cstdio>
 #include <psifiles.h>
 
 #include "sblock_vector.h"
@@ -58,4 +59,4 @@ void SBlockVector::check(const char* cstr)
   }
 }
 
-}}
\ No newline at end of file
+}}
diff --git a/src/bin/mcscf/scf.cc b/src/bin/mcscf/scf.cc
index 77318fd..7d1e17f 100644
--- a/src/bin/mcscf/scf.cc
+++ b/src/bin/mcscf/scf.cc
@@ -5,6 +5,7 @@
 
 #include <iostream>
 #include <cmath>
+#include <cstdio>
 
 extern FILE* outfile;
 
diff --git a/src/bin/mcscf/scf_Feff.cc b/src/bin/mcscf/scf_Feff.cc
index 584aa83..8a99c3b 100644
--- a/src/bin/mcscf/scf_Feff.cc
+++ b/src/bin/mcscf/scf_Feff.cc
@@ -1,4 +1,5 @@
 #include <liboptions/liboptions.h>
+#include <cstdio>
 
 #include "scf.h"
 
diff --git a/src/bin/mcscf/scf_canonicalize_MO.cc b/src/bin/mcscf/scf_canonicalize_MO.cc
index a2b3915..96bb6cc 100644
--- a/src/bin/mcscf/scf_canonicalize_MO.cc
+++ b/src/bin/mcscf/scf_canonicalize_MO.cc
@@ -1,6 +1,7 @@
 #include "scf.h"
 
 #include <liboptions/liboptions.h>
+#include <cstdio>
 
 namespace psi{ namespace mcscf{
 
diff --git a/src/bin/mcscf/scf_check_orthonormality.cc b/src/bin/mcscf/scf_check_orthonormality.cc
index 63fbbbb..a13436c 100644
--- a/src/bin/mcscf/scf_check_orthonormality.cc
+++ b/src/bin/mcscf/scf_check_orthonormality.cc
@@ -1,5 +1,6 @@
 #include <iostream>
 #include <cmath>
+#include <cstdio>
 
 #include "scf.h"
 
diff --git a/src/bin/mcscf/scf_compute_energy.cc b/src/bin/mcscf/scf_compute_energy.cc
index fe7ee6d..20194eb 100644
--- a/src/bin/mcscf/scf_compute_energy.cc
+++ b/src/bin/mcscf/scf_compute_energy.cc
@@ -1,4 +1,5 @@
 #include <iostream>
+#include <cstdio>
 
 #include "scf.h"
 
diff --git a/src/bin/mcscf/scf_diis.cc b/src/bin/mcscf/scf_diis.cc
index 9bcde15..261492a 100644
--- a/src/bin/mcscf/scf_diis.cc
+++ b/src/bin/mcscf/scf_diis.cc
@@ -1,4 +1,5 @@
 #include <iostream>
+#include <cstdio>
 
 #include <liboptions/liboptions.h>
 
diff --git a/src/bin/mcscf/scf_iterate_scf_equations.cc b/src/bin/mcscf/scf_iterate_scf_equations.cc
index 9e96360..3a3acc3 100644
--- a/src/bin/mcscf/scf_iterate_scf_equations.cc
+++ b/src/bin/mcscf/scf_iterate_scf_equations.cc
@@ -1,6 +1,7 @@
 #include <cstdlib>
 #include <iostream>
 #include <cmath>
+#include <cstdio>
 
 #include <liboptions/liboptions.h>
 
diff --git a/src/bin/mcscf/scf_pairs.cc b/src/bin/mcscf/scf_pairs.cc
index b0a8c9d..af5fc35 100644
--- a/src/bin/mcscf/scf_pairs.cc
+++ b/src/bin/mcscf/scf_pairs.cc
@@ -1,4 +1,5 @@
 #include <iostream>
+#include <cstdio>
 
 #include <libmoinfo/libmoinfo.h>
 
diff --git a/src/bin/mcscf/scf_print_eigenvectors_and_MO.cc b/src/bin/mcscf/scf_print_eigenvectors_and_MO.cc
index 3aac92a..e28e9e3 100644
--- a/src/bin/mcscf/scf_print_eigenvectors_and_MO.cc
+++ b/src/bin/mcscf/scf_print_eigenvectors_and_MO.cc
@@ -3,6 +3,7 @@
 #include <string>
 #include <utility>
 #include <algorithm>
+#include <cstdio>
 
 #include <libmoinfo/libmoinfo.h>
 
diff --git a/src/bin/psimrcc/blas_algorithms.cc b/src/bin/psimrcc/blas_algorithms.cc
index bb36025..0a5a3e2 100644
--- a/src/bin/psimrcc/blas_algorithms.cc
+++ b/src/bin/psimrcc/blas_algorithms.cc
@@ -1,5 +1,6 @@
 #include <libmoinfo/libmoinfo.h>
 #include <libutil/libutil.h>
+#include <cstdio>
 
 #include "blas.h"
 #include "memory_manager.h"
diff --git a/src/bin/psimrcc/blas_compatibile.cc b/src/bin/psimrcc/blas_compatibile.cc
index 8de6d73..7caf4f3 100644
--- a/src/bin/psimrcc/blas_compatibile.cc
+++ b/src/bin/psimrcc/blas_compatibile.cc
@@ -1,6 +1,7 @@
 #include "blas.h"
 #include <libutil/libutil.h>
 #include <cstdlib>
+#include <cstdio>
 
 extern FILE *infile, *outfile;
 
diff --git a/src/bin/psimrcc/blas_parser.cc b/src/bin/psimrcc/blas_parser.cc
index d211a24..78fe60a 100644
--- a/src/bin/psimrcc/blas_parser.cc
+++ b/src/bin/psimrcc/blas_parser.cc
@@ -3,6 +3,7 @@
 #include "debugging.h"
 #include <libutil/libutil.h>
 #include <algorithm>
+#include <cstdio>
 
 namespace psi{ namespace psimrcc{
 
diff --git a/src/bin/psimrcc/blas_solve.cc b/src/bin/psimrcc/blas_solve.cc
index b138a5b..f5dcdfc 100644
--- a/src/bin/psimrcc/blas_solve.cc
+++ b/src/bin/psimrcc/blas_solve.cc
@@ -1,6 +1,7 @@
 #include "blas.h"
 #include "debugging.h"
 #include <libmoinfo/libmoinfo.h>
+#include <cstdio>
 
 namespace psi{ namespace psimrcc{
 
diff --git a/src/bin/psimrcc/index.cc b/src/bin/psimrcc/index.cc
index 3465d88..68c2b77 100644
--- a/src/bin/psimrcc/index.cc
+++ b/src/bin/psimrcc/index.cc
@@ -5,6 +5,7 @@
  ***************************************************************************/
 #include <iostream>
 #include <algorithm>
+#include <cstdio>
 
 #include <libmoinfo/libmoinfo.h>
 
diff --git a/src/bin/psimrcc/operation.cc b/src/bin/psimrcc/operation.cc
index edbaed5..f4e881f 100644
--- a/src/bin/psimrcc/operation.cc
+++ b/src/bin/psimrcc/operation.cc
@@ -7,6 +7,7 @@
 #include "debugging.h"
 #include "blas.h"
 #include <libutil/libutil.h>
+#include <cstdio>
 
 namespace psi{ namespace psimrcc{
 
diff --git a/src/bin/psimrcc/operation_compute.cc b/src/bin/psimrcc/operation_compute.cc
index 7d2553c..72a1b39 100644
--- a/src/bin/psimrcc/operation_compute.cc
+++ b/src/bin/psimrcc/operation_compute.cc
@@ -11,6 +11,7 @@
 #include "algebra_interface.h"
 #include <libmoinfo/libmoinfo.h>
 #include <cstdlib>
+#include <cstdio>
 
 extern FILE *infile, *outfile;
 
diff --git a/src/bin/psimrcc/sort_out_of_core.cc b/src/bin/psimrcc/sort_out_of_core.cc
index 3f255c9..8fa31a3 100644
--- a/src/bin/psimrcc/sort_out_of_core.cc
+++ b/src/bin/psimrcc/sort_out_of_core.cc
@@ -8,6 +8,7 @@
 #include "sort.h"
 #include "matrix.h"
 #include <libmoinfo/libmoinfo.h>
+#include <cstdio>
 
 extern FILE* outfile;
 
diff --git a/src/lib/libmoinfo/moinfo_model_space.cc b/src/lib/libmoinfo/moinfo_model_space.cc
index 3bf2030..0a63cde 100644
--- a/src/lib/libmoinfo/moinfo_model_space.cc
+++ b/src/lib/libmoinfo/moinfo_model_space.cc
@@ -1,6 +1,7 @@
 #include <iostream>
 #include <cmath>
 #include <cstdlib>
+#include <cstdio>
 
 #include <psifiles.h>
 #include <liboptions/liboptions.h>
@@ -322,4 +323,4 @@ vector<string> MOInfo::get_matrix_names(std::string str)
   return(names);
 }
 
-}
\ No newline at end of file
+}
diff --git a/src/lib/libmoinfo/moinfo_slaterdeterminant.cc b/src/lib/libmoinfo/moinfo_slaterdeterminant.cc
index 8831cd5..a046679 100644
--- a/src/lib/libmoinfo/moinfo_slaterdeterminant.cc
+++ b/src/lib/libmoinfo/moinfo_slaterdeterminant.cc
@@ -1,4 +1,5 @@
 #include <iostream>
+#include <cstdio>
 #include "moinfo.h"
 
 extern FILE *infile, *outfile;
diff --git a/src/lib/libutil/stl_string.cc b/src/lib/libutil/stl_string.cc
index 0ec247d..f719dcd 100644
--- a/src/lib/libutil/stl_string.cc
+++ b/src/lib/libutil/stl_string.cc
@@ -2,6 +2,7 @@
 #include <cmath>
 #include <iomanip>
 #include <algorithm>
+#include <cstdio>
 
 #include "libutil.h"