[gentoo-commits] gentoo-x86 commit in sci-biology/muscle: ChangeLog muscle-3.7.ebuild muscle-3.6.ebuild muscle-3.8.31.ebuild

[Justin Lecher (jlec)]

jlec        10/06/24 19:03:18

  Modified:             ChangeLog muscle-3.7.ebuild muscle-3.6.ebuild
  Added:                muscle-3.8.31.ebuild
  Log:
  Version BUmp, blocking sci-libs/libmuscle, #308707
  (Portage version: 2.2_rc67/cvs/Linux x86_64)

Revision  Changes    Path
1.10                 sci-biology/muscle/ChangeLog

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/muscle/ChangeLog?rev=1.10&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/muscle/ChangeLog?rev=1.10&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/muscle/ChangeLog?r1=1.9&r2=1.10

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/muscle/ChangeLog,v
retrieving revision 1.9
retrieving revision 1.10
diff -u -r1.9 -r1.10
--- ChangeLog	21 Mar 2008 21:23:44 -0000	1.9
+++ ChangeLog	24 Jun 2010 19:03:18 -0000	1.10
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/muscle
-# Copyright 1999-2008 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/muscle/ChangeLog,v 1.9 2008/03/21 21:23:44 dberkholz Exp $
+# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/muscle/ChangeLog,v 1.10 2010/06/24 19:03:18 jlec Exp $
+
+*muscle-3.8.31 (24 Jun 2010)
+
+  24 Jun 2010; Justin Lecher <jlec@g.o> +files/3.8.31-make.patch,
+  muscle-3.6.ebuild, muscle-3.7.ebuild, +muscle-3.8.31.ebuild:
+  Version BUmp, blocking sci-libs/libmuscle, #308707
 
 *muscle-3.7 (21 Mar 2008)
 



1.2                  sci-biology/muscle/muscle-3.7.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/muscle/muscle-3.7.ebuild?rev=1.2&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/muscle/muscle-3.7.ebuild?rev=1.2&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/muscle/muscle-3.7.ebuild?r1=1.1&r2=1.2

Index: muscle-3.7.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/muscle/muscle-3.7.ebuild,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- muscle-3.7.ebuild	21 Mar 2008 21:23:44 -0000	1.1
+++ muscle-3.7.ebuild	24 Jun 2010 19:03:18 -0000	1.2
@@ -1,6 +1,6 @@
-# Copyright 1999-2008 Gentoo Foundation
+# Copyright 1999-2010 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/muscle/muscle-3.7.ebuild,v 1.1 2008/03/21 21:23:44 dberkholz Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/muscle/muscle-3.7.ebuild,v 1.2 2010/06/24 19:03:18 jlec Exp $
 
 inherit toolchain-funcs
 
@@ -8,12 +8,15 @@
 DESCRIPTION="Multiple sequence comparison by log-expectation"
 HOMEPAGE="http://www.drive5.com/muscle/"
 SRC_URI="http://www.drive5.com/muscle/downloads${PV}/${MY_P}.tar.gz"
+
 LICENSE="public-domain"
 SLOT="0"
 KEYWORDS="~amd64 ~ppc ~x86"
 IUSE=""
-RDEPEND=""
+
+RDEPEND="!sci-libs/libmuscle"
 DEPEND="${RDEPEND}"
+
 S="${WORKDIR}"
 
 src_unpack() {



1.6                  sci-biology/muscle/muscle-3.6.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/muscle/muscle-3.6.ebuild?rev=1.6&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/muscle/muscle-3.6.ebuild?rev=1.6&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/muscle/muscle-3.6.ebuild?r1=1.5&r2=1.6

Index: muscle-3.6.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/muscle/muscle-3.6.ebuild,v
retrieving revision 1.5
retrieving revision 1.6
diff -u -r1.5 -r1.6
--- muscle-3.6.ebuild	26 Dec 2007 10:25:01 -0000	1.5
+++ muscle-3.6.ebuild	24 Jun 2010 19:03:18 -0000	1.6
@@ -1,6 +1,6 @@
-# Copyright 1999-2007 Gentoo Foundation
+# Copyright 1999-2010 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/muscle/muscle-3.6.ebuild,v 1.5 2007/12/26 10:25:01 drac Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/muscle/muscle-3.6.ebuild,v 1.6 2010/06/24 19:03:18 jlec Exp $
 
 inherit toolchain-funcs
 
@@ -9,11 +9,14 @@
 HOMEPAGE="http://www.drive5.com/muscle/"
 SRC_URI="http://www.drive5.com/muscle/downloads${PV}/${MY_P}.tar.gz"
 LICENSE="public-domain"
+
 SLOT="0"
 KEYWORDS="amd64 ppc x86"
 IUSE=""
-RDEPEND=""
+
+RDEPEND="!sci-libs/libmuscle"
 DEPEND="${RDEPEND}"
+
 S="${WORKDIR}/${MY_P}"
 
 src_unpack() {



1.1                  sci-biology/muscle/muscle-3.8.31.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/muscle/muscle-3.8.31.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/muscle/muscle-3.8.31.ebuild?rev=1.1&content-type=text/plain

Index: muscle-3.8.31.ebuild
===================================================================
# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/muscle/muscle-3.8.31.ebuild,v 1.1 2010/06/24 19:03:18 jlec Exp $

EAPI="3"

inherit eutils toolchain-funcs

MY_P="${PN}${PV}_src"

DESCRIPTION="Multiple sequence comparison by log-expectation"
HOMEPAGE="http://www.drive5.com/muscle/"
SRC_URI="http://www.drive5.com/muscle/downloads${PV}/${MY_P}.tar.gz"

LICENSE="public-domain"
SLOT="0"
KEYWORDS="~amd64 ~ppc ~x86"
IUSE=""

RDEPEND="!sci-libs/libmuscle"
DEPEND=""

S="${WORKDIR}"/${PN}${PV}/src

src_prepare() {
	epatch "${FILESDIR}"/${PV}-make.patch
	tc-export CXX
}

src_install() {
	dobin "${PN}" || die
	dodoc *.txt || die
}