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commit: a300ee7a49ca26ba081d397ca413625dd4df4656 |
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Author: Justin Lecher <jlec <AT> gentoo <DOT> org> |
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AuthorDate: Sat Oct 29 11:04:39 2016 +0000 |
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Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> |
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CommitDate: Sat Oct 29 11:10:59 2016 +0000 |
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URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a300ee7a |
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|
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sci-biology/rebase: Bump to latest DB |
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|
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Package-Manager: portage-2.3.2 |
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Signed-off-by: Justin Lecher <jlec <AT> gentoo.org> |
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|
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sci-biology/rebase/Manifest | 1 + |
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sci-biology/rebase/rebase-1611.ebuild | 46 +++++++++++++++++++++++++++++++++++ |
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2 files changed, 47 insertions(+) |
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|
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diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest |
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index a41476f..c89b185 100644 |
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--- a/sci-biology/rebase/Manifest |
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+++ b/sci-biology/rebase/Manifest |
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@@ -3,3 +3,4 @@ DIST rebase-1604.tar.xz 102817536 SHA256 f234eadba5aa30573d664c9d9caab480ecbb383 |
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DIST rebase-1607.tar.xz 111124484 SHA256 2d795db3cc8cf7ff22eda983334e480b9c7b61c5b5ed9d38e2d626489fc4cefe SHA512 b166f75d6d82efe68f9e2521e26c7dc1bf34dde168d6eb94195f2f938316b0c7d06a11684de7d71e9bef2f3051a12c848c87a0d48bb6e148f6f84e9f694ced48 WHIRLPOOL 823054e6b366b707ba1be105fd6172f315358ba07ac8cfb7bbafdac3b9f14718e3406bb4b1c048b18dc8422ead4da09512b61758470bd5ca6a8d9141ebb5c578 |
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DIST rebase-1608.tar.xz 113417576 SHA256 ce8872adbe09c756af4bded43bde43e45d82b14642454fad05da8deef271bb81 SHA512 989d353cb9d73039d6c08805c4d32dbef1bdd37683f4c2ead5fa4889eae05bf3bdba54214d199b87961d8ace4d950f21dbc749e955867f8c6ccac766c7a06520 WHIRLPOOL bc89aa9230680ac08d3c17f7068bb45cb28dbf45038ffda5c2b4660fe366cdc32376ca32439953a2faa7524c6a5c4811a124288b85cf8320ef324458e3957d70 |
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DIST rebase-1609.tar.xz 140865364 SHA256 0799f4a1dae79eaea6629425f6dae104951b94777dc58866adceb4277c577f51 SHA512 3a06a67c7df78f3eb6214dece1f2045ce2610cf34efc8f9eb34b97ca2aa818ea9b52124da1b44895a5a53ec45b19bb78f0cc036b2053e28f1cb72087cd42ad35 WHIRLPOOL fcd5ff5674465cab269dbe8c4f7e5c2c33f6b3b2a515e3f1c1a8c8b60fc68ecca1f48ea4c363ce52b77ddfd50e8fc9c22aad69b7ebc190ccdcfcd2b52d3bc27b |
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+DIST rebase-1611.tar.xz 117976252 SHA256 fcfe506c8f018b8d7b43c5f87e4125310e43d2d2ea5f3ea6b3523f9d23ae7d1c SHA512 33287d497e399a7cfb8e7dc6e2b905553303b4b8dce49066eafc3f48cac47e9e3fd8c8736a7a0352ed5fd5da39aca220ed59884f887a5588cedc2d5e56b6e764 WHIRLPOOL 52758d6017e0725bd2f84cb2cd4f16b3965a21f45a664ed71078d50b95a64664239936a605052bc3b34ef67e70cb96fd5b1e2005bdc699be9cff9f919b197734 |
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|
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diff --git a/sci-biology/rebase/rebase-1611.ebuild b/sci-biology/rebase/rebase-1611.ebuild |
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new file mode 100644 |
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index 00000000..47f2e43 |
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--- /dev/null |
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+++ b/sci-biology/rebase/rebase-1611.ebuild |
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@@ -0,0 +1,46 @@ |
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+# Copyright 1999-2016 Gentoo Foundation |
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+# Distributed under the terms of the GNU General Public License v2 |
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+# $Id$ |
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+ |
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+EAPI=6 |
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+ |
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+MY_PV=${PV#1} |
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+ |
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+DESCRIPTION="A restriction enzyme database" |
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+HOMEPAGE="http://rebase.neb.com" |
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+SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" |
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+ |
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+SLOT="0" |
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+LICENSE="public-domain" |
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+KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris" |
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+IUSE="emboss minimal" |
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+ |
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+RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )" |
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+DEPEND="${RDEPEND}" |
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+ |
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+RESTRICT="binchecks strip" |
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+ |
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+src_compile() { |
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+ if use emboss; then |
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+ echo; einfo "Indexing Rebase for usage with EMBOSS." |
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+ mkdir REBASE || die |
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+ EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \ |
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+ -protofile proto.${MY_PV} -equivalences \ |
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+ || die "Indexing Rebase failed." |
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+ echo |
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+ fi |
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+} |
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+ |
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+src_install() { |
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+ if ! use minimal; then |
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+ insinto /usr/share/${PN} |
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+ doins withrefm.${MY_PV} proto.${MY_PV} |
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+ fi |
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+ newdoc REBASE.DOC README |
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+ if use emboss; then |
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+ insinto /usr/share/EMBOSS/data/REBASE |
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+ doins REBASE/embossre.{enz,ref,sup} |
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+ insinto /usr/share/EMBOSS/data |
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+ doins REBASE/embossre.equ |
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+ fi |
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+} |
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