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| From: | "Justin Lecher (jlec)" <jlec@g.o> |
|---|---|
| To: | gentoo-commits@l.g.o |
| Subject: | [gentoo-commits] gentoo-x86 commit in sci-biology/rebase: ChangeLog rebase-1311.ebuild |
| Date: | Sat, 02 Nov 2013 12:38:56 |
| Message-Id: | 20131102123852.88AA52004B@flycatcher.gentoo.org |
| 1 | jlec 13/11/02 12:38:52 |
| 2 | |
| 3 | Modified: ChangeLog |
| 4 | Added: rebase-1311.ebuild |
| 5 | Log: |
| 6 | sci-biology/rebase: Version BUmp |
| 7 | |
| 8 | (Portage version: 2.2.7/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!) |
| 9 | |
| 10 | Revision Changes Path |
| 11 | 1.117 sci-biology/rebase/ChangeLog |
| 12 | |
| 13 | file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/ChangeLog?rev=1.117&view=markup |
| 14 | plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/ChangeLog?rev=1.117&content-type=text/plain |
| 15 | diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/ChangeLog?r1=1.116&r2=1.117 |
| 16 | |
| 17 | Index: ChangeLog |
| 18 | =================================================================== |
| 19 | RCS file: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v |
| 20 | retrieving revision 1.116 |
| 21 | retrieving revision 1.117 |
| 22 | diff -u -r1.116 -r1.117 |
| 23 | --- ChangeLog 8 Oct 2013 14:15:03 -0000 1.116 |
| 24 | +++ ChangeLog 2 Nov 2013 12:38:52 -0000 1.117 |
| 25 | @@ -1,6 +1,11 @@ |
| 26 | # ChangeLog for sci-biology/rebase |
| 27 | # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 |
| 28 | -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.116 2013/10/08 14:15:03 jlec Exp $ |
| 29 | +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.117 2013/11/02 12:38:52 jlec Exp $ |
| 30 | + |
| 31 | +*rebase-1311 (02 Nov 2013) |
| 32 | + |
| 33 | + 02 Nov 2013; Justin Lecher <jlec@g.o> +rebase-1311.ebuild: |
| 34 | + Version BUmp |
| 35 | |
| 36 | *rebase-1310 (08 Oct 2013) |
| 37 | |
| 38 | |
| 39 | |
| 40 | |
| 41 | 1.1 sci-biology/rebase/rebase-1311.ebuild |
| 42 | |
| 43 | file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/rebase-1311.ebuild?rev=1.1&view=markup |
| 44 | plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/rebase-1311.ebuild?rev=1.1&content-type=text/plain |
| 45 | |
| 46 | Index: rebase-1311.ebuild |
| 47 | =================================================================== |
| 48 | # Copyright 1999-2013 Gentoo Foundation |
| 49 | # Distributed under the terms of the GNU General Public License v2 |
| 50 | # $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1311.ebuild,v 1.1 2013/11/02 12:38:52 jlec Exp $ |
| 51 | |
| 52 | EAPI=5 |
| 53 | |
| 54 | MY_PV=${PV#1} |
| 55 | |
| 56 | DESCRIPTION="A restriction enzyme database" |
| 57 | HOMEPAGE="http://rebase.neb.com" |
| 58 | SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" |
| 59 | |
| 60 | SLOT="0" |
| 61 | LICENSE="public-domain" |
| 62 | KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris" |
| 63 | IUSE="emboss minimal" |
| 64 | |
| 65 | RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )" |
| 66 | DEPEND="${RDEPEND}" |
| 67 | |
| 68 | RESTRICT="binchecks strip" |
| 69 | |
| 70 | src_compile() { |
| 71 | if use emboss; then |
| 72 | echo; einfo "Indexing Rebase for usage with EMBOSS." |
| 73 | mkdir REBASE |
| 74 | EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \ |
| 75 | -protofile proto.${MY_PV} -equivalences \ |
| 76 | || die "Indexing Rebase failed." |
| 77 | echo |
| 78 | fi |
| 79 | } |
| 80 | |
| 81 | src_install() { |
| 82 | if ! use minimal; then |
| 83 | insinto /usr/share/${PN} |
| 84 | doins withrefm.${MY_PV} proto.${MY_PV} |
| 85 | fi |
| 86 | newdoc REBASE.DOC README |
| 87 | if use emboss; then |
| 88 | insinto /usr/share/EMBOSS/data/REBASE |
| 89 | doins REBASE/embossre.{enz,ref,sup} |
| 90 | insinto /usr/share/EMBOSS/data |
| 91 | doins REBASE/embossre.equ |
| 92 | fi |
| 93 | } |