[gentoo-commits] proj/sci:master commit in: sci-biology/tigmint/

[Martin Mokrejs]

commit:     6c45174a480dae72e147dbf764bda33b72404a56
Author:     Martin Mokrejs <mmokrejs <AT> gmail <DOT> com>
AuthorDate: Tue Oct 19 15:06:25 2021 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Tue Oct 19 15:06:25 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=6c45174a

sci-biology/tigmint: drop KEYWORDS until python install path is fixed

The 'from read_fasta import read_fasta' is supposed to work but Makefile
places the file into $prefix.

Package-Manager: Portage-3.0.28, Repoman-3.0.3
Signed-off-by: Martin Mokrejs <mmokrejs <AT> gmail.com>

 sci-biology/tigmint/tigmint-1.2.4.ebuild | 27 ++++++++++++++++++++++++++-
 1 file changed, 26 insertions(+), 1 deletion(-)

diff --git a/sci-biology/tigmint/tigmint-1.2.4.ebuild b/sci-biology/tigmint/tigmint-1.2.4.ebuild
index 89d73318d..1b181ea44 100644
--- a/sci-biology/tigmint/tigmint-1.2.4.ebuild
+++ b/sci-biology/tigmint/tigmint-1.2.4.ebuild
@@ -13,7 +13,7 @@ SRC_URI="https://github.com/bcgsc/tigmint/releases/download/v${PV}/${P}.tar.gz"
 
 LICENSE="GPL-3"
 SLOT="0"
-KEYWORDS="~amd64 ~x86"
+KEYWORDS=""
 
 RESTRICT="test"
 
@@ -28,3 +28,28 @@ RDEPEND="
 "
 
 distutils_enable_tests pytest
+
+# install the executable into /usr/bin
+# BUG: the read_fasta.py should be installed into python modules
+#   so it can be imported into python
+src_prepare(){
+	sed -i Makefile -e 's#prefix=/usr/local#prefix=/usr#'
+	default
+}
+
+src_configure(){
+	python_setup
+	default
+}
+
+# do not run src_compile step as it runs git, makefile2graph, gsed, tred
+
+src_install(){
+	default
+	distutils-r1_src_install
+}
+
+src_test(){
+	default
+	python_foreach_impl python_test
+}