Gentoo Archives: gentoo-commits

From: Martin Mokrejs <mmokrejs@×××××××××××××××.cz>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/gbench/
Date: Mon, 27 Feb 2017 10:51:44
Message-Id: 1488192689.8cc84f42dc0f980df53ef795597193ef0a75e9c1.mmokrejs@gentoo
1 commit: 8cc84f42dc0f980df53ef795597193ef0a75e9c1
2 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
3 AuthorDate: Mon Feb 27 10:51:29 2017 +0000
4 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
5 CommitDate: Mon Feb 27 10:51:29 2017 +0000
6 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=8cc84f42
7
8 sci-biology/gbench: version bump
9
10 Does not compile for me like previous 2.10.7, upstream contacted
11
12 In file included from gbench-src-2.11.7/src/gui/opengl/glutbitmap.h:15:0,
13 from gbench-src-2.11.7/src/gui/opengl/ncbi_12x24.c:4:
14 gbench-src-2.11.7/include/gui/opengl.h:59:23: error: unknown type name 'GLEWContext'
15 NCBI_GUIOPENGL_EXPORT GLEWContext* glewGetContext();
16
17 Package-Manager: Portage-2.3.3, Repoman-2.3.1
18
19 sci-biology/gbench/{gbench-2.10.7.ebuild => gbench-2.11.7.ebuild} | 2 +-
20 1 file changed, 1 insertion(+), 1 deletion(-)
21
22 diff --git a/sci-biology/gbench/gbench-2.10.7.ebuild b/sci-biology/gbench/gbench-2.11.7.ebuild
23 similarity index 97%
24 rename from sci-biology/gbench/gbench-2.10.7.ebuild
25 rename to sci-biology/gbench/gbench-2.11.7.ebuild
26 index 48e7f9d68..2e3776202 100644
27 --- a/sci-biology/gbench/gbench-2.10.7.ebuild
28 +++ b/sci-biology/gbench/gbench-2.11.7.ebuild
29 @@ -79,7 +79,7 @@ src_configure(){
30 # Doh, it runs git during configure phase if it could not find NCBI SRA VDB
31 # by executing ./scripts/common/add_vdb.sh which points to https://github.com/ncbi/ncbi-vdb
32 # But, we already have sci-biology/sra_sdk which blocks sci-biology/ncbi-tools++
33 -# as some file overlap. Seems ncbi-vdb is yet another smaller subset of either
34 +# as some files overlap. Seems ncbi-vdb is yet another smaller subset of either
35 # of the two?
36 #
37 # Same come checking out ncbi-vdb should be in ncbi-tools++-18.0.0 .