[gentoo-commits] gentoo-x86 commit in sci-biology/bamtools: metadata.xml ChangeLog bamtools-2.2.3.ebuild

[Justin Lecher (jlec)]

jlec        13/01/28 08:35:06

  Modified:             metadata.xml ChangeLog
  Added:                bamtools-2.2.3.ebuild
  Log:
  sci-biology/bamtools: Version Bump; #452234; unbundles dev-libs/jsoncpp
  
  (Portage version: 2.2.0_alpha161/cvs/Linux x86_64, signed Manifest commit with key 70EB7916)

Revision  Changes    Path
1.2                  sci-biology/bamtools/metadata.xml

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bamtools/metadata.xml?rev=1.2&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bamtools/metadata.xml?rev=1.2&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bamtools/metadata.xml?r1=1.1&r2=1.2

Index: metadata.xml
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/bamtools/metadata.xml,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- metadata.xml	25 Feb 2012 17:46:03 -0000	1.1
+++ metadata.xml	28 Jan 2013 08:35:06 -0000	1.2
@@ -1,14 +1,14 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
 <pkgmetadata>
-	<herd>sci-biology</herd>
-	<maintainer>
-		<email>weaver@g.o</email>
-		<name>Andrey Kislyuk</name>
-	</maintainer>
-	<maintainer>
-		<email>mmokrejs@×××××××××××××××.cz</email>
-		<name>Martin Mokrejs</name>
-	</maintainer>
-	<longdescription>BAM (Binary Alignment/Map) format is useful for storing large DNA sequence alignments. It is closely related to the text-based SAM format, but optimized for random-access. BamTools provides a fast, flexible C++ API for reading and writing BAM files.</longdescription>
+  <herd>sci-biology</herd>
+  <maintainer>
+    <email>weaver@g.o</email>
+    <name>Andrey Kislyuk</name>
+  </maintainer>
+  <maintainer>
+    <email>mmokrejs@×××××××××××××××.cz</email>
+    <name>Martin Mokrejs</name>
+  </maintainer>
+  <longdescription>BAM (Binary Alignment/Map) format is useful for storing large DNA sequence alignments. It is closely related to the text-based SAM format, but optimized for random-access. BamTools provides a fast, flexible C++ API for reading and writing BAM files.</longdescription>
 </pkgmetadata>



1.4                  sci-biology/bamtools/ChangeLog

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bamtools/ChangeLog?rev=1.4&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bamtools/ChangeLog?rev=1.4&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bamtools/ChangeLog?r1=1.3&r2=1.4

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/bamtools/ChangeLog,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- ChangeLog	26 Apr 2012 16:44:38 -0000	1.3
+++ ChangeLog	28 Jan 2013 08:35:06 -0000	1.4
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/bamtools
-# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bamtools/ChangeLog,v 1.3 2012/04/26 16:44:38 jlec Exp $
+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bamtools/ChangeLog,v 1.4 2013/01/28 08:35:06 jlec Exp $
+
+*bamtools-2.2.3 (28 Jan 2013)
+
+  28 Jan 2013; Justin Lecher <jlec@g.o> +bamtools-2.2.3.ebuild,
+  +files/bamtools-2.2.3-unbundle.patch, metadata.xml:
+  Version Bump; #452234; unbundles dev-libs/jsoncpp
 
   26 Apr 2012; Justin Lecher <jlec@g.o> bamtools-1.0.2.ebuild:
   Remove unnecessary die



1.1                  sci-biology/bamtools/bamtools-2.2.3.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bamtools/bamtools-2.2.3.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bamtools/bamtools-2.2.3.ebuild?rev=1.1&content-type=text/plain

Index: bamtools-2.2.3.ebuild
===================================================================
# Copyright 1999-2013 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/bamtools/bamtools-2.2.3.ebuild,v 1.1 2013/01/28 08:35:06 jlec Exp $

EAPI=4

inherit cmake-utils

DESCRIPTION="A programmer's API and an end-user's toolkit for handling BAM files"
HOMEPAGE="https://github.com/pezmaster31/bamtools"
SRC_URI="https://github.com/pezmaster31/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz"

LICENSE="MIT"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE="static-libs"

DEPEND="
	dev-libs/jsoncpp
	sys-libs/zlib"
RDEPEND="${DEPEND}"

PATCHES=( "${FILESDIR}"/${P}-unbundle.patch )

src_install() {
	cmake-utils_src_install
	use static-libs || rm "${ED}"/usr/$(get_libdir)/*.a
}