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weaver 10/02/03 15:48:02 |
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Modified: mira-3.0.0.ebuild ChangeLog |
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Log: |
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Install 3rd party files |
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(Portage version: 2.2_rc30/cvs/Linux x86_64) |
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Revision Changes Path |
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1.2 sci-biology/mira/mira-3.0.0.ebuild |
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file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/mira/mira-3.0.0.ebuild?rev=1.2&view=markup |
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plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/mira/mira-3.0.0.ebuild?rev=1.2&content-type=text/plain |
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diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/mira/mira-3.0.0.ebuild?r1=1.1&r2=1.2 |
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Index: mira-3.0.0.ebuild |
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=================================================================== |
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RCS file: /var/cvsroot/gentoo-x86/sci-biology/mira/mira-3.0.0.ebuild,v |
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retrieving revision 1.1 |
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retrieving revision 1.2 |
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diff -u -r1.1 -r1.2 |
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--- mira-3.0.0.ebuild 3 Feb 2010 03:06:22 -0000 1.1 |
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+++ mira-3.0.0.ebuild 3 Feb 2010 15:48:01 -0000 1.2 |
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@@ -1,14 +1,17 @@ |
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# Copyright 1999-2010 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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-# $Header: /var/cvsroot/gentoo-x86/sci-biology/mira/mira-3.0.0.ebuild,v 1.1 2010/02/03 03:06:22 weaver Exp $ |
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+# $Header: /var/cvsroot/gentoo-x86/sci-biology/mira/mira-3.0.0.ebuild,v 1.2 2010/02/03 15:48:01 weaver Exp $ |
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|
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EAPI="2" |
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|
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-inherit base |
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+MIRA_3RDPARTY_PV="31-01-2010" |
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+ |
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+inherit base autotools |
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|
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DESCRIPTION="Whole Genome Shotgun and EST Sequence Assembler for Sanger, 454 and Solexa / Illumina" |
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HOMEPAGE="http://www.chevreux.org/projects_mira.html" |
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-SRC_URI="mirror://sourceforge/mira-assembler/${P}.tar.bz2" |
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+SRC_URI="mirror://sourceforge/mira-assembler/${P}.tar.bz2 |
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+ mirror://sourceforge/mira-assembler/mira_3rdparty_${MIRA_3RDPARTY_PV}.tar.bz2" |
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|
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LICENSE="GPL-2" |
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SLOT="0" |
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@@ -22,7 +25,9 @@ |
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RDEPEND="${CDEPEND}" |
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src_prepare() { |
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- find -name configure -or -name 'Makefile*' | xargs sed -i 's/flex++/flex -+/' || die |
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+ find -name 'configure*' -or -name 'Makefile*' | xargs sed -i 's/flex++/flex -+/' || die |
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+ # sed -i -e 's/AC_CXX_HAVE_STL/AX_CXX_HAVE_STL/' -e 's/AC_CXX_HAVE_STD/AX_CXX_HAVE_STD/' configure.in || die |
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+ # FIXME: eautoreconf |
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} |
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src_compile() { |
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@@ -35,4 +40,5 @@ |
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dodoc AUTHORS GETTING_STARTED NEWS README* HELP_WANTED THANKS INSTALL |
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find doc/docs/man -type f | xargs doman |
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find doc/docs/texinfo -type f | xargs doinfo |
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+ dobin "${WORKDIR}"/3rdparty/{sff_extract,*.pl} |
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} |
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1.2 sci-biology/mira/ChangeLog |
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file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/mira/ChangeLog?rev=1.2&view=markup |
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plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/mira/ChangeLog?rev=1.2&content-type=text/plain |
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diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/mira/ChangeLog?r1=1.1&r2=1.2 |
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Index: ChangeLog |
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=================================================================== |
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RCS file: /var/cvsroot/gentoo-x86/sci-biology/mira/ChangeLog,v |
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retrieving revision 1.1 |
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retrieving revision 1.2 |
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diff -u -r1.1 -r1.2 |
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--- ChangeLog 3 Feb 2010 03:06:22 -0000 1.1 |
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+++ ChangeLog 3 Feb 2010 15:48:01 -0000 1.2 |
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@@ -1,6 +1,9 @@ |
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# ChangeLog for sci-biology/mira |
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# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 |
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-# $Header: /var/cvsroot/gentoo-x86/sci-biology/mira/ChangeLog,v 1.1 2010/02/03 03:06:22 weaver Exp $ |
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+# $Header: /var/cvsroot/gentoo-x86/sci-biology/mira/ChangeLog,v 1.2 2010/02/03 15:48:01 weaver Exp $ |
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+ |
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+ 03 Feb 2010; Andrey Kislyuk <weaver@g.o> mira-3.0.0.ebuild: |
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+ Install 3rd party files |
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|
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*mira-3.0.0 (02 Feb 2010) |
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