Gentoo Archives: gentoo-commits

From: David Seifert <soap@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] repo/gentoo:master commit in: dev-python/pyamg/files/, dev-python/pyamg/
Date: Mon, 28 Dec 2020 15:50:17
Message-Id: 1609170593.67871f63cf6eef11ea46f2bea168c6d4f08c1520.soap@gentoo
1 commit: 67871f63cf6eef11ea46f2bea168c6d4f08c1520
2 Author: Jakov Smolic <jakov.smolic <AT> sartura <DOT> hr>
3 AuthorDate: Mon Dec 28 15:49:53 2020 +0000
4 Commit: David Seifert <soap <AT> gentoo <DOT> org>
5 CommitDate: Mon Dec 28 15:49:53 2020 +0000
6 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=67871f63
7
8 dev-python/pyamg: Bump to 4.0.0
9
10 Closes: https://bugs.gentoo.org/738128
11
12 Signed-off-by: Jakov Smolic <jakov.smolic <AT> sartura.hr>
13 Signed-off-by: David Seifert <soap <AT> gentoo.org>
14
15 dev-python/pyamg/Manifest | 1 +
16 dev-python/pyamg/files/pyamg-4.0.0-test.patch | 14 ++++++++++++++
17 dev-python/pyamg/pyamg-4.0.0.ebuild | 25 +++++++++++++++++++++++++
18 3 files changed, 40 insertions(+)
19
20 diff --git a/dev-python/pyamg/Manifest b/dev-python/pyamg/Manifest
21 index d3ed6ae9df1..27a0eed3b90 100644
22 --- a/dev-python/pyamg/Manifest
23 +++ b/dev-python/pyamg/Manifest
24 @@ -1 +1,2 @@
25 DIST pyamg-3.2.1.tar.gz 765723 BLAKE2B 72c59c0fe93363f73d8ba4c6297920dd1ca8406b048cf0357baec5f2390bdb524421a35ef65e790be45b543e9e162067ee8f8f09327b464a4bc5c9cec368b003 SHA512 6be0dd068417389934ce97813321367920abf6f9f5e94ce2df8bd796edc797cedd492c9153b62466f7d68055a05821447dcf21578ccdfe3294766a49a9ac220e
26 +DIST pyamg-4.0.0.tar.gz 717171 BLAKE2B 16483d829e8a938359827ca8ebe3093c890685244125576e05220910b66e9aeec278472134d10c589e58dfbd363930cdd7ae13d16c9b9d54c1bd5250e66f4677 SHA512 cdd27834c12ef18f023e78b5b946c06bc2c35f73cf65fc4c76da2fab75f23466e6c1a4b3dccb8506be3ada7e0bafda38122d3d7315deebc7959d2e5300d9add1
27
28 diff --git a/dev-python/pyamg/files/pyamg-4.0.0-test.patch b/dev-python/pyamg/files/pyamg-4.0.0-test.patch
29 new file mode 100644
30 index 00000000000..316d0a2baad
31 --- /dev/null
32 +++ b/dev-python/pyamg/files/pyamg-4.0.0-test.patch
33 @@ -0,0 +1,14 @@
34 +Backported from: https://github.com/pyamg/pyamg/commit/6f5e549e6105e18cfff9bf4b5f1834d081fa4510
35 +Author: Luke Olson
36 +--- a/pyamg/aggregation/tests/test_smooth.py
37 ++++ b/pyamg/aggregation/tests/test_smooth.py
38 +@@ -485,6 +485,9 @@ class TestEnergyMin(TestCase):
39 + Bc = ml.levels[1].B
40 + P = ml.levels[0].P.tocsr()
41 +
42 ++ T.eliminate_zeros()
43 ++ P.eliminate_zeros()
44 ++
45 + # P should preserve B in its range, wherever P
46 + # has enough nonzeros
47 + mask = ((P.indptr[1:] - P.indptr[:-1]) >= B.shape[1])
48
49 diff --git a/dev-python/pyamg/pyamg-4.0.0.ebuild b/dev-python/pyamg/pyamg-4.0.0.ebuild
50 new file mode 100644
51 index 00000000000..798cc36c9ec
52 --- /dev/null
53 +++ b/dev-python/pyamg/pyamg-4.0.0.ebuild
54 @@ -0,0 +1,25 @@
55 +# Copyright 1999-2020 Gentoo Authors
56 +# Distributed under the terms of the GNU General Public License v2
57 +
58 +EAPI=7
59 +
60 +DISTUTILS_USE_SETUPTOOLS=bdepend
61 +PYTHON_COMPAT=( python3_{6..9} )
62 +inherit distutils-r1
63 +
64 +DESCRIPTION="Algebraic multigrid solvers in Python"
65 +HOMEPAGE="https://pyamg.org"
66 +SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
67 +
68 +LICENSE="BSD"
69 +SLOT="0"
70 +KEYWORDS="~amd64 ~x86"
71 +
72 +RDEPEND="
73 + dev-python/numpy[${PYTHON_USEDEP}]
74 + dev-python/pybind11[${PYTHON_USEDEP}]
75 + dev-python/scipy[${PYTHON_USEDEP}]"
76 +
77 +distutils_enable_tests setup.py
78 +
79 +PATCHES=( "${FILESDIR}"/${P}-test.patch )