[gentoo-commits] proj/sci:master commit in: sci-biology/BlastToSam/

[Martin Mokrejs]

commit:     8b9ba1e22ea4df15ddbb35556ad9a92f9b397ea6
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Wed Apr 29 19:36:12 2015 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Wed Apr 29 19:36:12 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=8b9ba1e2

sci-biology/BlastToSam: new package, works

Package-Manager: portage-2.2.18

 sci-biology/BlastToSam/BlastToSam-9999.ebuild | 31 +++++++++++++++++++++++++++
 sci-biology/BlastToSam/ChangeLog              |  9 ++++++++
 sci-biology/BlastToSam/metadata.xml           |  9 ++++++++
 3 files changed, 49 insertions(+)

diff --git a/sci-biology/BlastToSam/BlastToSam-9999.ebuild b/sci-biology/BlastToSam/BlastToSam-9999.ebuild
new file mode 100644
index 0000000..7b476cd
--- /dev/null
+++ b/sci-biology/BlastToSam/BlastToSam-9999.ebuild
@@ -0,0 +1,31 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+inherit git-r3 java-pkg-2 java-ant-2
+
+DESCRIPTION="Convert NCBI BLAST output to SAM format"
+HOMEPAGE="https://github.com/AstrorEnales/BlastToSam"
+EGIT_REPO_URI="https://github.com/AstrorEnales/BlastToSam.git"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS=""
+IUSE=""
+
+RDEPEND=">=virtual/jre-1.5:*"
+DEPEND="${RDEPEND}
+	>=virtual/jdk-1.5:*
+	dev-java/ant-core"
+
+src_compile() {
+	ant compile || die
+}
+
+src_install() {
+	java-pkg_dojar build/jar/BlastToSam.jar
+	java-pkg_dolauncher
+	dodoc README.md
+}

diff --git a/sci-biology/BlastToSam/ChangeLog b/sci-biology/BlastToSam/ChangeLog
new file mode 100644
index 0000000..945f023
--- /dev/null
+++ b/sci-biology/BlastToSam/ChangeLog
@@ -0,0 +1,9 @@
+# ChangeLog for sci-biology/BlastToSam
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*BlastToSam-9999 (29 Apr 2015)
+
+  29 Apr 2015; Martin Mokrejs <mmokrejs@×××××××××××××××.cz>
+  +BlastToSam-9999.ebuild, +metadata.xml:
+  sci-biology/BlastToSam: new package, works

diff --git a/sci-biology/BlastToSam/metadata.xml b/sci-biology/BlastToSam/metadata.xml
new file mode 100644
index 0000000..2bc8930
--- /dev/null
+++ b/sci-biology/BlastToSam/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <herd>sci-biology</herd>
+  <maintainer>
+    <email>mmokrejs@×××××××××××××××.cz</email>
+    <name>Martin Mokrejs</name>
+  </maintainer>
+</pkgmetadata>