[gentoo-commits] proj/sci:master commit in: sci-libs/trilinos/

[Marius Brehler]

commit:     971b1776cb9a0c70e4f0b2937822fcf932ff9046
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Tue Aug 30 01:11:38 2016 +0000
Commit:     Marius Brehler <marbre <AT> linux <DOT> sungazer <DOT> de>
CommitDate: Tue Aug 30 01:11:38 2016 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=971b1776

sci-libs/trilinos: version bump to 12.6.4

Package-Manager: portage-2.2.28

 sci-libs/trilinos/trilinos-12.6.4.ebuild | 208 +++++++++++++++++++++++++++++++
 1 file changed, 208 insertions(+)

diff --git a/sci-libs/trilinos/trilinos-12.6.4.ebuild b/sci-libs/trilinos/trilinos-12.6.4.ebuild
new file mode 100644
index 0000000..707a6f1
--- /dev/null
+++ b/sci-libs/trilinos/trilinos-12.6.4.ebuild
@@ -0,0 +1,208 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+inherit cmake-utils toolchain-funcs multilib toolchain-funcs
+
+DESCRIPTION="Scientific library collection for large scale problems"
+HOMEPAGE="http://trilinos.sandia.gov/"
+SRC_URI="http://trilinos.org/oldsite/download/files/${P}-Source.tar.gz"
+
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+
+LICENSE="BSD LGPL-2.1"
+SLOT="0"
+
+IUSE="
+	adolc arprec boost clp cppunit cuda eigen glpk gtest hdf5 hwloc hypre
+	matio metis mkl mumps netcdf petsc qd qt4 scalapack scotch sparse
+	superlu taucs tbb test threads tvmet yaml zlib
+"
+
+# TODO: fix export cmake function for tests
+RESTRICT="test"
+
+RDEPEND="
+	sys-libs/binutils-libs
+	virtual/blas
+	virtual/lapack
+	virtual/mpi
+	adolc? ( sci-libs/adolc )
+	arprec? ( sci-libs/arprec )
+	boost? ( dev-libs/boost )
+	clp? ( sci-libs/coinor-clp )
+	cuda? ( >=dev-util/nvidia-cuda-toolkit-3.2 )
+	eigen? ( dev-cpp/eigen:3 )
+	gtest? ( dev-cpp/gtest )
+	hdf5? ( sci-libs/hdf5[mpi] )
+	hypre? ( sci-libs/hypre )
+	hwloc? ( sys-apps/hwloc )
+	matio? ( sci-libs/matio )
+	mkl? ( sci-libs/mkl )
+	metis? ( || ( sci-libs/parmetis sci-libs/metis ) )
+	mumps? ( sci-libs/mumps )
+	netcdf? ( sci-libs/netcdf )
+	petsc? ( sci-mathematics/petsc )
+	qd? ( sci-libs/qd )
+	qt4? ( dev-qt/qtgui:4 )
+	scalapack? ( virtual/scalapack )
+	scotch? ( sci-libs/scotch )
+	sparse? ( sci-libs/cxsparse sci-libs/umfpack )
+	superlu? ( sci-libs/superlu )
+	taucs? ( sci-libs/taucs )
+	tbb? ( dev-cpp/tbb )
+	tvmet? ( dev-libs/tvmet )
+	yaml? ( dev-cpp/yaml-cpp )
+	zlib? ( sys-libs/zlib )"
+DEPEND="${RDEPEND}
+	virtual/pkgconfig"
+
+S="${WORKDIR}/${P}-Source"
+
+trilinos_conf() {
+	local dirs libs d
+	for d in $($(tc-getPKG_CONFIG) --libs-only-L $1); do
+		dirs="${dirs};${d:2}"
+	done
+	[[ -n ${dirs} ]] && mycmakeargs+=( "-D${2}_LIBRARY_DIRS=${dirs:1}" )
+	for d in $($(tc-getPKG_CONFIG) --libs-only-l $1); do
+		libs="${libs};${d:2}"
+	done
+	[[ -n ${libs} ]] && mycmakeargs+=( "-D${2}_LIBRARY_NAMES=${libs:1}" )
+	dirs=""
+	for d in $($(tc-getPKG_CONFIG) --cflags-only-I $1); do
+		dirs="${dirs};${d:2}"
+	done
+	[[ -n ${dirs} ]] && mycmakeargs+=( "-D${2}_INCLUDE_DIRS=${dirs:1}" )
+}
+
+trilinos_enable() {
+	cmake-utils_use $1 TPL_ENABLE_${2:-${1^^}}
+}
+
+src_prepare() {
+	epatch "${FILESDIR}"/${PN}-11.14.1-fix-install-paths.patch \
+		"${FILESDIR}"/${PN}-12.6.2-fix_install_paths_for_destdir.patch
+}
+
+src_configure() {
+
+	# temporarily disable SEACAS and pyTrilinos compilation
+	local mycmakeargs=(
+		-DBUILD_SHARED_LIBS=ON
+		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"
+		-DTrilinos_ENABLE_ALL_PACKAGES=ON
+		-DTrilinos_ENABLE_SEACAS=OFF
+		-DTrilinos_ENABLE_PyTrilinos=OFF
+		-DTrilinos_INSTALL_INCLUDE_DIR="${EPREFIX}/usr/include/trilinos"
+		-DTrilinos_INSTALL_LIB_DIR="${EPREFIX}/usr/$(get_libdir)/trilinos"
+		-DTrilinos_INSTALL_CONFIG_DIR="${EPREFIX}/usr/$(get_libdir)/cmake"
+		-DTPL_ENABLE_BinUtils=ON
+		-DTPL_ENABLE_MPI=ON
+		-DTPL_ENABLE_BLAS=ON
+		-DTPL_ENABLE_LAPACK=ON
+		$(cmake-utils_use test Trilinos_ENABLE_TESTS)
+		$(trilinos_enable adolc)
+		$(trilinos_enable arprec)
+		$(trilinos_enable boost Boost)
+		$(trilinos_enable boost BoostLib)
+		$(trilinos_enable cppunit Cppunit)
+		$(trilinos_enable clp Clp)
+		$(trilinos_enable cuda)
+		$(trilinos_enable cuda CUSPARSE)
+		$(trilinos_enable cuda Thrust)
+		$(trilinos_enable eigen Eigen)
+		$(trilinos_enable gtest gtest)
+		$(trilinos_enable glpk)
+		$(trilinos_enable hdf5)
+		$(trilinos_enable hwloc)
+		$(trilinos_enable hypre)
+		$(trilinos_enable matio)
+		$(trilinos_enable metis)
+		$(trilinos_enable mkl)
+		$(trilinos_enable mkl PARDISO_MKL)
+		$(trilinos_enable mumps)
+		$(trilinos_enable netcdf Netcdf)
+		$(trilinos_enable petsc)
+		$(trilinos_enable qd)
+		$(trilinos_enable qt4 QT)
+		$(trilinos_enable scalapack)
+		$(trilinos_enable scalapack BLACS)
+		$(trilinos_enable scotch Scotch)
+		$(trilinos_enable sparse AMD)
+		$(trilinos_enable sparse CSparse)
+		$(trilinos_enable sparse UMFPACK)
+		$(trilinos_enable superlu SuperLU)
+		$(trilinos_enable taucs)
+		$(trilinos_enable tbb)
+		$(trilinos_enable threads Pthread)
+		$(trilinos_enable tvmet)
+		$(trilinos_enable yaml yaml-cpp)
+		$(trilinos_enable zlib Zlib)
+	)
+
+	use eigen && \
+		mycmakeargs+=(
+		-DEigen_INCLUDE_DIRS="${EPREFIX}/usr/include/eigen3"
+	)
+	use hypre && \
+		mycmakeargs+=(
+		-DHYPRE_INCLUDE_DIRS="${EPREFIX}/usr/include/hypre"
+	)
+	use scotch && \
+		mycmakeargs+=(
+		-DScotch_INCLUDE_DIRS="${EPREFIX}/usr/include/scotch"
+	)
+
+	# cxsparse is a rewrite of csparse + extras
+	use sparse && \
+		mycmakeargs+=(
+		-DCSparse_LIBRARY_NAMES="cxsparse"
+	)
+
+	# mandatory blas and lapack
+	trilinos_conf blas BLAS
+	trilinos_conf lapack LAPACK
+	use superlu && trilinos_conf superlu SuperLU
+	use metis && trilinos_conf metis METIS
+
+	# blacs library is included in scalapack these days
+	if use scalapack; then
+		trilinos_conf scalapack SCALAPACK
+		mycmakeargs+=(
+			-DBLACS_LIBRARY_NAMES="scalapack"
+			-DBLACS_INCLUDE_DIRS="${EPREFIX}/usr/include/blacs"
+		)
+	fi
+
+	# TODO: do we need that line?
+	export CC=mpicc CXX=mpicxx && tc-export CC CXX
+
+	# cmake-utils eclass patches the base directory CMakeLists.txt
+	# which does not work for complex Trilinos CMake modules
+	CMAKE_BUILD_TYPE=RELEASE cmake-utils_src_configure
+
+	# TODO:
+	# python bindings with python-r1
+	# fix hypre bindings
+	# fix hdf5
+	# cuda/thrust is untested
+	# do we always need mpi? and for all packages: blah[mpi] ?
+	# install docs, examples
+	# see what packages are related, do we need REQUIRED_USE
+	# proper use flags description
+	# add more use flags/packages ?
+}
+
+src_install() {
+	cmake-utils_src_install
+
+	# register $(get_libdir)/trilinos in LDPATH so that the dynamic linker
+	# has a chance to pick up the libraries...
+	cat >> "${T}"/99trilinos <<- EOF
+	LDPATH="${EPREFIX}/usr/$(get_libdir)/trilinos"
+	EOF
+	doenvd "${T}"/99trilinos
+}