[gentoo-commits] proj/sci:master commit in: sci-chemistry/mgltools-opengltk/, sci-chemistry/mgltools-pybabel/, ...

[Aisha Tammy]

sci-chemistry/mgltools-pybabel/mgltools-pybabel-1.5.6.ebuild sci-chemistry/mgltools-pyglf/metadata.xml sci-chemistry/mgltools-pyglf/mgltools-pyglf-1.5.6.ebuild sci-chemistry/mgltools-qslimlib/files/1.5.4-gcc4.3.patch sci-chemistry/mgltools-qslimlib/files/1.5.4-gcc4.7.patch sci-chemistry/mgltools-qslimlib/metadata.xml sci-chemistry/mgltools-qslimlib/mgltools-qslimlib-1.5.6.ebuild sci-chemistry/mgltools-scenario2/metadata.xml sci-chemistry/mgltools-scenario2/mgltools-scenario2-1.5.6.ebuild sci-chemistry/mgltools-sff/files/1.5.4-impl-dec.patch sci-chemistry/mgltools-sff/metadata.xml sci-chemistry/mgltools-sff/mgltools-sff-1.5.6.ebuild sci-chemistry/mgltools-support/metadata.xml sci-chemistry/mgltools-support/mgltools-support-1.5.6.ebuild sci-chemistry/mgltools-symserv/metadata.xml sci-chemistry/mgltools-symserv/mgltools-symserv-1.5.6.ebuild sci-chemistry/mgltools-utpackages/files/1.5.4-gcc4.3.patch sci-chemistry/mgltools-utpackages/metadata.xml sci-chemistry/mgltools-utpackages/mgltools
 -utpackages-1.5.6.ebuild sci-chemistry/mgltools-viewer-framework/metadata.xml sci-chemistry/mgltools-viewer-framework/mgltools-viewer-framework-1.5.6.ebuild sci-chemistry/mgltools-vision/metadata.xml sci-chemistry/mgltools-vision/mgltools-vision-1.5.6.ebuild sci-chemistry/mgltools-visionlib/metadata.xml sci-chemistry/mgltools-visionlib/mgltools-visionlib-1.5.6.ebuild sci-chemistry/mgltools-volume/metadata.xml sci-chemistry/mgltools-volume/mgltools-volume-1.5.6.ebuild sci-chemistry/mgltools-webservices/metadata.xml sci-chemistry/mgltools-webservices/mgltools-webservices-1.5.6.ebuild
X-VCS-Directories: sci-chemistry/mgltools-gle/ sci-chemistry/mgltools-dejavu/ sci-chemistry/mgltools-cmolkit/ sci-chemistry/mgltools-webservices/ sci-chemistry/mgltools-opengltk/files/ sci-chemistry/mgltools-utpackages/ sci-chemistry/mgltools-qslimlib/ sci-chemistry/mgltools-mglutil/files/ sci-chemistry/mgltools-visionlib/ sci-chemistry/mgltools-sff/files/ sci-chemistry/mgltools-geomutils/files/ sci-chemistry/mgltools-qslimlib/files/ sci-chemistry/mgltools-pmv/ sci-chemistry/mgltools-pyautodock/ sci-chemistry/mgltools-sff/ sci-chemistry/mgltools-molkit/ sci-chemistry/mgltools-mglutil/ sci-chemistry/mgltools-vision/ sci-chemistry/mgltools-pybabel/ sci-chemistry/mgltools-geomutils/ sci-chemistry/mgltools-gle/files/ sci-chemistry/mgltools-pmv/files/ sci-chemistry/mgltools-autodocktools/ sci-chemistry/mgltools-viewer-framework/ sci-chemistry/mgltools-opengltk/ sci-chemistry/mgltools-symserv/ sci-chemistry/mgltools-utpackages/files/ sci-chemistry/mgltools-scenario2/ sci-chemistry/mgltools
 -volume/ sci-chemistry/mgltools-dejavu/files/ sci-chemistry/mgltools-cadd/ sci-chemistry/mgltools-bhtree/ sci-chemistry/mgltools-support/ sci-chemistry/mgltools-networkeditor/ sci-chemistry/mgltools-pyglf/
X-VCS-Committer: epsilon-0
X-VCS-Committer-Name: Aisha Tammy
X-VCS-Revision: 7ca6bd50be8603a79a15c575669a7fb7e04732fb
X-VCS-Branch: master
Date: Sat, 26 Sep 2020 22:00:46 +0000 (UTC)

commit:     7ca6bd50be8603a79a15c575669a7fb7e04732fb
Author:     Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Sat Sep 26 21:59:56 2020 +0000
Commit:     Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Sat Sep 26 21:59:56 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=7ca6bd50

sci-chemistry/mgltools-*: drop all subpackages

debating if i should keep the top one

Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>

 sci-chemistry/mgltools-autodocktools/metadata.xml  |   8 --
 .../mgltools-autodocktools-1.5.6.ebuild            |  66 -------------
 sci-chemistry/mgltools-bhtree/metadata.xml         |   8 --
 .../mgltools-bhtree/mgltools-bhtree-1.5.6.ebuild   |  43 ---------
 sci-chemistry/mgltools-cadd/metadata.xml           |   8 --
 .../mgltools-cadd/mgltools-cadd-1.5.6.ebuild       |  42 ---------
 sci-chemistry/mgltools-cmolkit/metadata.xml        |   8 --
 .../mgltools-cmolkit/mgltools-cmolkit-1.5.6.ebuild |  42 ---------
 .../files/mgltools-dejavu-1.5.6-pil.patch          |  43 ---------
 sci-chemistry/mgltools-dejavu/metadata.xml         |   8 --
 .../mgltools-dejavu-1.5.6-r1.ebuild                |  47 ----------
 .../mgltools-geomutils/files/1.5.4-gcc4.3.patch    |   9 --
 .../mgltools-geomutils/files/1.5.4-impl-dec.patch  |  12 ---
 sci-chemistry/mgltools-geomutils/metadata.xml      |   8 --
 .../mgltools-geomutils-1.5.6.ebuild                |  42 ---------
 .../files/mgltools-gle-1.5.6-swig.patch            |  43 ---------
 sci-chemistry/mgltools-gle/metadata.xml            |   8 --
 .../mgltools-gle/mgltools-gle-1.5.6.ebuild         |  44 ---------
 .../mgltools-mglutil/files/1.5.4-python.patch      |  13 ---
 .../files/mgltools-mglutil-1.5.6-tcltk86.patch     | 104 ---------------------
 sci-chemistry/mgltools-mglutil/metadata.xml        |   8 --
 .../mgltools-mglutil-1.5.6-r1.ebuild               |  48 ----------
 sci-chemistry/mgltools-molkit/metadata.xml         |   8 --
 .../mgltools-molkit/mgltools-molkit-1.5.6.ebuild   |  44 ---------
 sci-chemistry/mgltools-networkeditor/metadata.xml  |   8 --
 .../mgltools-networkeditor-1.5.6.ebuild            |  44 ---------
 .../files/mgltools-opengltk-1.5.6_rc2-glew.patch   |  16 ----
 .../mgltools-opengltk-1.5.6_rc2-unbundle.patch     |  28 ------
 sci-chemistry/mgltools-opengltk/metadata.xml       |   8 --
 .../mgltools-opengltk-1.5.6.ebuild                 |  60 ------------
 .../files/mgltools-pmv-1.5.6_rc2-code-fix.patch    |  66 -------------
 sci-chemistry/mgltools-pmv/metadata.xml            |   8 --
 .../mgltools-pmv/mgltools-pmv-1.5.6.ebuild         |  52 -----------
 sci-chemistry/mgltools-pyautodock/metadata.xml     |   8 --
 .../mgltools-pyautodock-1.5.6.ebuild               |  42 ---------
 sci-chemistry/mgltools-pybabel/metadata.xml        |   8 --
 .../mgltools-pybabel/mgltools-pybabel-1.5.6.ebuild |  44 ---------
 sci-chemistry/mgltools-pyglf/metadata.xml          |   8 --
 .../mgltools-pyglf/mgltools-pyglf-1.5.6.ebuild     |  42 ---------
 .../mgltools-qslimlib/files/1.5.4-gcc4.3.patch     |  52 -----------
 .../mgltools-qslimlib/files/1.5.4-gcc4.7.patch     |  30 ------
 sci-chemistry/mgltools-qslimlib/metadata.xml       |   8 --
 .../mgltools-qslimlib-1.5.6.ebuild                 |  46 ---------
 sci-chemistry/mgltools-scenario2/metadata.xml      |   8 --
 .../mgltools-scenario2-1.5.6.ebuild                |  45 ---------
 .../mgltools-sff/files/1.5.4-impl-dec.patch        |  12 ---
 sci-chemistry/mgltools-sff/metadata.xml            |   8 --
 .../mgltools-sff/mgltools-sff-1.5.6.ebuild         |  43 ---------
 sci-chemistry/mgltools-support/metadata.xml        |   8 --
 .../mgltools-support/mgltools-support-1.5.6.ebuild |  42 ---------
 sci-chemistry/mgltools-symserv/metadata.xml        |   8 --
 .../mgltools-symserv/mgltools-symserv-1.5.6.ebuild |  42 ---------
 .../mgltools-utpackages/files/1.5.4-gcc4.3.patch   |  11 ---
 sci-chemistry/mgltools-utpackages/metadata.xml     |   8 --
 .../mgltools-utpackages-1.5.6.ebuild               |  42 ---------
 .../mgltools-viewer-framework/metadata.xml         |   8 --
 .../mgltools-viewer-framework-1.5.6.ebuild         |  47 ----------
 sci-chemistry/mgltools-vision/metadata.xml         |   8 --
 .../mgltools-vision/mgltools-vision-1.5.6.ebuild   |  53 -----------
 sci-chemistry/mgltools-visionlib/metadata.xml      |   8 --
 .../mgltools-visionlib-1.5.6.ebuild                |  42 ---------
 sci-chemistry/mgltools-volume/metadata.xml         |   8 --
 .../mgltools-volume/mgltools-volume-1.5.6.ebuild   |  44 ---------
 sci-chemistry/mgltools-webservices/metadata.xml    |   8 --
 .../mgltools-webservices-1.5.6.ebuild              |  42 ---------
 65 files changed, 1837 deletions(-)

diff --git a/sci-chemistry/mgltools-autodocktools/metadata.xml b/sci-chemistry/mgltools-autodocktools/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-autodocktools/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-autodocktools/mgltools-autodocktools-1.5.6.ebuild b/sci-chemistry/mgltools-autodocktools/mgltools-autodocktools-1.5.6.ebuild
deleted file mode 100644
index 7af92f5db..000000000
--- a/sci-chemistry/mgltools-autodocktools/mgltools-autodocktools-1.5.6.ebuild
+++ /dev/null
@@ -1,66 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-PYTHON_REQ_USE="tk"
-
-inherit distutils-r1 eutils
-
-MY_PN="AutoDockTools"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- AutoDockTools"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="
-	dev-python/zsi[${PYTHON_USEDEP}]
-	sci-chemistry/autodock
-	sci-chemistry/mgltools-dejavu[${PYTHON_USEDEP}]
-	sci-chemistry/mgltools-geomutils[${PYTHON_USEDEP}]
-	sci-chemistry/mgltools-mglutil[${PYTHON_USEDEP}]
-	sci-chemistry/mgltools-molkit[${PYTHON_USEDEP}]
-	sci-chemistry/mgltools-opengltk[${PYTHON_USEDEP}]
-	sci-chemistry/mgltools-pmv[${PYTHON_USEDEP}]
-	sci-chemistry/mgltools-pybabel[${PYTHON_USEDEP}]
-	sci-chemistry/mgltools-pyglf[${PYTHON_USEDEP}]
-	sci-chemistry/mgltools-support[${PYTHON_USEDEP}]
-	sci-chemistry/mgltools-viewer-framework[${PYTHON_USEDEP}]
-	dev-python/pillow[tk,${PYTHON_USEDEP}]
-"
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-DOCS=( AutoDockTools/RELNOTES )
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}
-
-python_install_all() {
-	distutils-r1_python_install_all
-
-	sed '1s:^.*$:#!/usr/bin/python:g' -i AutoDockTools/bin/runAdt || die
-	python_foreach_impl python_doscript AutoDockTools/bin/runAdt
-}

diff --git a/sci-chemistry/mgltools-bhtree/metadata.xml b/sci-chemistry/mgltools-bhtree/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-bhtree/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-bhtree/mgltools-bhtree-1.5.6.ebuild b/sci-chemistry/mgltools-bhtree/mgltools-bhtree-1.5.6.ebuild
deleted file mode 100644
index da8462b7d..000000000
--- a/sci-chemistry/mgltools-bhtree/mgltools-bhtree-1.5.6.ebuild
+++ /dev/null
@@ -1,43 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-PYTHON_REQ_USE="tk"
-
-inherit distutils-r1 eutils
-
-MY_PN="bhtree"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- bhtree"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="dev-python/numpy[${PYTHON_USEDEP}]"
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-cadd/metadata.xml b/sci-chemistry/mgltools-cadd/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-cadd/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-cadd/mgltools-cadd-1.5.6.ebuild b/sci-chemistry/mgltools-cadd/mgltools-cadd-1.5.6.ebuild
deleted file mode 100644
index 3f6ccc4ec..000000000
--- a/sci-chemistry/mgltools-cadd/mgltools-cadd-1.5.6.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="CADD"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- CADD"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND=""
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-cmolkit/metadata.xml b/sci-chemistry/mgltools-cmolkit/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-cmolkit/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-cmolkit/mgltools-cmolkit-1.5.6.ebuild b/sci-chemistry/mgltools-cmolkit/mgltools-cmolkit-1.5.6.ebuild
deleted file mode 100644
index 0b1ee8975..000000000
--- a/sci-chemistry/mgltools-cmolkit/mgltools-cmolkit-1.5.6.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="cMolKit"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- cMolKit"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND=""
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-dejavu/files/mgltools-dejavu-1.5.6-pil.patch b/sci-chemistry/mgltools-dejavu/files/mgltools-dejavu-1.5.6-pil.patch
deleted file mode 100644
index 0ac1abdea..000000000
--- a/sci-chemistry/mgltools-dejavu/files/mgltools-dejavu-1.5.6-pil.patch
+++ /dev/null
@@ -1,43 +0,0 @@
- DejaVu/Camera.py  | 12 +++++++++---
- DejaVu/Texture.py |  5 ++++-
- 2 files changed, 13 insertions(+), 4 deletions(-)
-
-diff --git a/DejaVu/Camera.py b/DejaVu/Camera.py
-index 9ecc0eb..555666a 100644
---- a/DejaVu/Camera.py
-+++ b/DejaVu/Camera.py
-@@ -38,9 +38,15 @@ This Module implements the Camera class and the Fog class.
- 
- import os, sys, warnings
- 
--import Image
--import ImageFilter
--import ImageChops
-+try:
-+    import Image
-+    import ImageFilter
-+    import ImageChops
-+except ImportError:
-+    from PIL import Image
-+    from PIL import ImageFilter
-+    from PIL import ImageChops
-+
- 
- import tkMessageBox
- 
-diff --git a/DejaVu/Texture.py b/DejaVu/Texture.py
-index dccc280..bcf16be 100644
---- a/DejaVu/Texture.py
-+++ b/DejaVu/Texture.py
-@@ -15,7 +15,10 @@
- #
- 
- import sys, os
--import Image
-+try:
-+    import Image
-+except ImportError:
-+    from PIL import Image
- import numpy.oldnumeric as Numeric
- import warnings
- 

diff --git a/sci-chemistry/mgltools-dejavu/metadata.xml b/sci-chemistry/mgltools-dejavu/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-dejavu/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-dejavu/mgltools-dejavu-1.5.6-r1.ebuild b/sci-chemistry/mgltools-dejavu/mgltools-dejavu-1.5.6-r1.ebuild
deleted file mode 100644
index 01029173c..000000000
--- a/sci-chemistry/mgltools-dejavu/mgltools-dejavu-1.5.6-r1.ebuild
+++ /dev/null
@@ -1,47 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-PYTHON_REQ_USE="tk"
-
-inherit distutils-r1 eutils
-
-MY_PN="DejaVu"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- DejaVu"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND=""
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-DOCS=( DejaVu/RELNOTES )
-
-PATCHES=( "${FILESDIR}"/${P}-pil.patch )
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-geomutils/files/1.5.4-gcc4.3.patch b/sci-chemistry/mgltools-geomutils/files/1.5.4-gcc4.3.patch
deleted file mode 100644
index ac7c2bdc0..000000000
--- a/sci-chemistry/mgltools-geomutils/files/1.5.4-gcc4.3.patch
+++ /dev/null
@@ -1,9 +0,0 @@
---- geomutils-1.5.4/src/geomAlgorithms/objfile.cpp	2007-06-26 01:04:34.000000000 +0200
-+++ geomutils-1.5.4/src/geomAlgorithms/objfile.cpp.new	2009-05-17 20:30:43.597472969 +0200
-@@ -1,5 +1,6 @@
- #include <assert.h>
- #include <fstream>
-+#include <cstring>
- 
- #include "objfile.h"
- 

diff --git a/sci-chemistry/mgltools-geomutils/files/1.5.4-impl-dec.patch b/sci-chemistry/mgltools-geomutils/files/1.5.4-impl-dec.patch
deleted file mode 100644
index 468d23544..000000000
--- a/sci-chemistry/mgltools-geomutils/files/1.5.4-impl-dec.patch
+++ /dev/null
@@ -1,12 +0,0 @@
-diff --git a/src/efit/efit.c b/src/efit/efit.c
-index cfdf7b4..ef71e37 100644
---- a/src/efit/efit.c
-+++ b/src/efit/efit.c
-@@ -6,6 +6,7 @@
- 
- #include <stdio.h>
- #include <math.h>
-+#include <string.h>
- 
- #define EFIT_MAIN 1
- 

diff --git a/sci-chemistry/mgltools-geomutils/metadata.xml b/sci-chemistry/mgltools-geomutils/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-geomutils/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-geomutils/mgltools-geomutils-1.5.6.ebuild b/sci-chemistry/mgltools-geomutils/mgltools-geomutils-1.5.6.ebuild
deleted file mode 100644
index 53c34289b..000000000
--- a/sci-chemistry/mgltools-geomutils/mgltools-geomutils-1.5.6.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="geomutils"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- geomutils"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="dev-python/numpy[${PYTHON_USEDEP}]"
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-gle/files/mgltools-gle-1.5.6-swig.patch b/sci-chemistry/mgltools-gle/files/mgltools-gle-1.5.6-swig.patch
deleted file mode 100644
index 4b632df88..000000000
--- a/sci-chemistry/mgltools-gle/files/mgltools-gle-1.5.6-swig.patch
+++ /dev/null
@@ -1,43 +0,0 @@
- gle-1.5.6/gle/gle.i | 8 ++++----
- 1 file changed, 4 insertions(+), 4 deletions(-)
-
-diff --git a/gle-1.5.6/gle/gle.i b/gle-1.5.6/gle/gle.i
-index bc48694..76170f1 100644
---- a/gle-1.5.6/gle/gle.i
-+++ b/gle-1.5.6/gle/gle.i
-@@ -149,7 +149,7 @@ glePolyCone_c4f (int npoints,	 /* numpoints in poly-line */
-                    gleColor4f color_array[1],	/* colors at polyline verts */
-                    gleDouble radius_array[1]); /* cone radii at polyline verts */
- 
--#typemaps for Numeric arrays
-+/* typemaps for Numeric arrays */
- DOUBLE_ARRAY2D( contour, [1][2], ncp )
- %apply double ARRAY2D[ANY][ANY] { double cont_normal[1][2] };
- %apply double VECTOR_NULL[ANY] { double up[3] };
-@@ -172,7 +172,7 @@ gleExtrusion_c4f (int ncp,         /* number of contour points */
-                 gleDouble point_array[1][3], /* polyline vertices */
-                 gleColor4f color_array[1]); /* colors at polyline verts */
- 
--#typemaps for Numeric arrays
-+/* typemaps for Numeric arrays */
- %apply double VECTOR[ANY] { double twist_array[1] };
- 
- /* extrude 2D contour, specifying local rotations (twists) */
-@@ -195,7 +195,7 @@ gleTwistExtrusion_c4f (int ncp,         /* number of contour points */
-                 gleDouble twist_array[1]);   /* countour twists (in degrees) */
- 
- 
--#typemaps for Numeric arrays
-+/* typemaps for Numeric arrays */
- %apply double ARRAY3D_NULL[ANY][ANY][ANY] { double xform_array[1][2][3] };
- 
- /* extrude 2D contour, specifying local affine tranformations */
-@@ -218,7 +218,7 @@ gleSuperExtrusion_c4f (int ncp,  /* number of contour points */
-                 gleColor4f color_array[1],        /* color at polyline verts */
-                 gleDouble xform_array[1][2][3]);   /* 2D contour xforms */
- 
--#typemaps for Numeric arrays
-+/* typemaps for Numeric arrays */
- %apply double ARRAY2D_NULL[ANY][ANY] { double startXform[2][3] };
- %apply double ARRAY2D_NULL[ANY][ANY] { double dXformdTheta[2][3] };
- 

diff --git a/sci-chemistry/mgltools-gle/metadata.xml b/sci-chemistry/mgltools-gle/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-gle/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-gle/mgltools-gle-1.5.6.ebuild b/sci-chemistry/mgltools-gle/mgltools-gle-1.5.6.ebuild
deleted file mode 100644
index b4a972135..000000000
--- a/sci-chemistry/mgltools-gle/mgltools-gle-1.5.6.ebuild
+++ /dev/null
@@ -1,44 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-PYTHON_REQ_USE="tk"
-
-inherit distutils-r1 eutils
-
-MY_PN="gle"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- gle"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="virtual/opengl"
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	local PATCHES=( "${FILESDIR}"/${P}-swig.patch )
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-mglutil/files/1.5.4-python.patch b/sci-chemistry/mgltools-mglutil/files/1.5.4-python.patch
deleted file mode 100644
index c2fecf8f5..000000000
--- a/sci-chemistry/mgltools-mglutil/files/1.5.4-python.patch
+++ /dev/null
@@ -1,13 +0,0 @@
-diff --git a/mglutil/math/Tests/test_matToAxis.py b/mglutil/math/Tests/test_matToAxis.py
-index 25befa4..acf75f3 100644
---- a/mglutil/math/Tests/test_matToAxis.py
-+++ b/mglutil/math/Tests/test_matToAxis.py
-@@ -33,7 +33,7 @@ def rotateObject():
-     for i in range(len(m1)):
-         if fabs(m1[i]-m2[i]) > 1e-4:
-             bSame = False
--    assert (bSame, True)
-+    assert bSame, True
- 
- 
- def test_rotateObject():

diff --git a/sci-chemistry/mgltools-mglutil/files/mgltools-mglutil-1.5.6-tcltk86.patch b/sci-chemistry/mgltools-mglutil/files/mgltools-mglutil-1.5.6-tcltk86.patch
deleted file mode 100644
index dc926cf83..000000000
--- a/sci-chemistry/mgltools-mglutil/files/mgltools-mglutil-1.5.6-tcltk86.patch
+++ /dev/null
@@ -1,104 +0,0 @@
-Index: mglutil-1.5.7~rc1+cvs.20150324/mglutil/gui/BasicWidgets/Tk/thumbwheel.py
-===================================================================
---- mglutil-1.5.7~rc1+cvs.20150324.orig/mglutil/gui/BasicWidgets/Tk/thumbwheel.py
-+++ mglutil-1.5.7~rc1+cvs.20150324/mglutil/gui/BasicWidgets/Tk/thumbwheel.py
-@@ -88,7 +88,8 @@
- #            checkkeywords(kw)
-             
- 	Tkinter.Frame.__init__(self, master)
--	Tkinter.Pack.config(self, side='left', anchor='w')
-+	#Tkinter.Pack.config(self, side='left', anchor='w')
-+	Tkinter.Pack.config(master, side='left', anchor='w')
- 
-         #FIXME: nblines are not dynamically computed
-         self.nblines = 30
-Index: mglutil-1.5.7~rc1+cvs.20150324/mglutil/gui/BasicWidgets/Tk/vector3DGUI.py
-===================================================================
---- mglutil-1.5.7~rc1+cvs.20150324.orig/mglutil/gui/BasicWidgets/Tk/vector3DGUI.py
-+++ mglutil-1.5.7~rc1+cvs.20150324/mglutil/gui/BasicWidgets/Tk/vector3DGUI.py
-@@ -86,7 +86,7 @@
-              [  0.25      ,  0.25      ,  0.93541437,  0.        ],
-              [  0.        ,  0.        ,  0.        ,  1.        ]],'f')
-         self.viewingMat = Numeric.transpose(self.viewingMatInv)
--        self.createCanvas(master, size)
-+        self.createCanvas(self, size)
-         self.createEntries(self.frame)
- 	Tkinter.Widget.bind(self.canvas, "<ButtonPress-1>", self.mouseDown)
- 	Tkinter.Widget.bind(self.canvas, "<ButtonRelease-1>", self.mouseUp)
-@@ -357,19 +357,22 @@
- 
-     def createEntries(self, master):
-         self.f = Tkinter.Frame(master)
--	self.f.grid(column=3, rowspan=3)
-+        self.f.pack(side='top', expand=1)
-+        self.f.grid = Tkinter.Frame(self.f)
-+        self.f.grid.pack(side='top', expand=1)
-+	self.f.grid.grid(column=3, rowspan=3)
- 
-         def fX(): self.vector = [1.,0.,0.]; self.setEntries(); self.callbacks.CallCallbacks(self.vector)
-         def fY(): self.vector = [0.,1.,0.]; self.setEntries(); self.callbacks.CallCallbacks(self.vector)
-         def fZ(): self.vector = [0.,0.,1.]; self.setEntries(); self.callbacks.CallCallbacks(self.vector)
--        lX = Tkinter.Button(master=self.f, text='x', command=fX)
--        lY = Tkinter.Button(master=self.f, text='y', command=fY)
--        lZ = Tkinter.Button(master=self.f, text='z', command=fZ)
-+        lX = Tkinter.Button(master=self.f.grid, text='x', command=fX)
-+        lY = Tkinter.Button(master=self.f.grid, text='y', command=fY)
-+        lZ = Tkinter.Button(master=self.f.grid, text='z', command=fZ)
-         lX.grid(row=0, column=0)
-         lY.grid(row=1, column=0)
-         lZ.grid(row=2, column=0)
- 
--        self.thumbx = ThumbWheel(master=self.f, width=50,
-+        self.thumbx = ThumbWheel(master=self.f.grid, width=50,
-                                  height=20, labcfg={'text':'X:','side':'left'},
-                                  wheelPad=2, oneTurn=.1, min=-1, max=1,
-                                  showLabel=0, precision=5, type=float)
-@@ -378,7 +381,7 @@
-         self.thumbx.canvas.unbind("<Button-3>")
-         self.thumbx.grid(row=0, column=1)
- 
--        self.thumby = ThumbWheel(master=self.f, width=50,
-+        self.thumby = ThumbWheel(master=self.f.grid, width=50,
-                                  height=20, labcfg={'text':'Y:','side':'left'},
-                                  wheelPad=2, oneTurn=.1, min=-1, max=1,
-                                  showLabel=0, precision=5, type=float)
-@@ -387,7 +390,7 @@
-         self.thumby.canvas.unbind("<Button-3>")
-         self.thumby.grid(row=1, column=1)
- 
--        self.thumbz = ThumbWheel(master=self.f, width=50,
-+        self.thumbz = ThumbWheel(master=self.f.grid, width=50,
-                                  height=20, labcfg={'text':'Z:','side':'left'},
-                                  wheelPad=2, oneTurn=.1, min=-1, max=1,
-                                  showLabel=0, precision=5, type=float)
-@@ -397,19 +400,19 @@
-         self.thumbz.grid(row=2, column=1)
- 
-         self.entryXTk = Tkinter.StringVar()
--        self.entryX = Tkinter.Entry(master=self.f, textvariable=self.entryXTk,
-+        self.entryX = Tkinter.Entry(master=self.f.grid, textvariable=self.entryXTk,
-                                     width=8)
-         self.entryX.bind('<Return>', self.entryX_cb)
-         self.entryX.grid(row=0, column=2)
- 
-         self.entryYTk = Tkinter.StringVar()
--        self.entryY = Tkinter.Entry(master=self.f, textvariable=self.entryYTk,
-+        self.entryY = Tkinter.Entry(master=self.f.grid, textvariable=self.entryYTk,
-                                     width=8)
-         self.entryY.bind('<Return>', self.entryY_cb)
-         self.entryY.grid(row=1, column=2)
- 
-         self.entryZTk = Tkinter.StringVar()
--        self.entryZ = Tkinter.Entry(master=self.f, textvariable=self.entryZTk,
-+        self.entryZ = Tkinter.Entry(master=self.f.grid, textvariable=self.entryZTk,
-                                     width=8)
-         self.entryZ.bind('<Return>', self.entryZ_cb)
-         self.entryZ.grid(row=2, column=2)
-@@ -420,7 +423,6 @@
-         
-         self.entryV.bind('<Return>', self.entryV_cb)
-         
--        self.f.pack(side='top', expand=1)
- 
-         self.entryV.pack()
-         

diff --git a/sci-chemistry/mgltools-mglutil/metadata.xml b/sci-chemistry/mgltools-mglutil/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-mglutil/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-mglutil/mgltools-mglutil-1.5.6-r1.ebuild b/sci-chemistry/mgltools-mglutil/mgltools-mglutil-1.5.6-r1.ebuild
deleted file mode 100644
index b15258435..000000000
--- a/sci-chemistry/mgltools-mglutil/mgltools-mglutil-1.5.6-r1.ebuild
+++ /dev/null
@@ -1,48 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="mglutil"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- mglutil"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND=""
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-DOCS=( mglutil/RELNOTES )
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	local PATCHES=(
-		"${FILESDIR}"/1.5.4-python.patch
-		"${FILESDIR}"/${P}-tcltk86.patch
-		)
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-molkit/metadata.xml b/sci-chemistry/mgltools-molkit/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-molkit/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-molkit/mgltools-molkit-1.5.6.ebuild b/sci-chemistry/mgltools-molkit/mgltools-molkit-1.5.6.ebuild
deleted file mode 100644
index dd79cf6ef..000000000
--- a/sci-chemistry/mgltools-molkit/mgltools-molkit-1.5.6.ebuild
+++ /dev/null
@@ -1,44 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="MolKit"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- MolKit"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="sci-chemistry/pdb2pqr"
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-DOCS=( MolKit/RELNOTES )
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-networkeditor/metadata.xml b/sci-chemistry/mgltools-networkeditor/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-networkeditor/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-networkeditor/mgltools-networkeditor-1.5.6.ebuild b/sci-chemistry/mgltools-networkeditor/mgltools-networkeditor-1.5.6.ebuild
deleted file mode 100644
index 8b2630d7a..000000000
--- a/sci-chemistry/mgltools-networkeditor/mgltools-networkeditor-1.5.6.ebuild
+++ /dev/null
@@ -1,44 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="NetworkEditor"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- NetworkEditor"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND=""
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-DOCS=( NetworkEditor/RELNOTES )
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-opengltk/files/mgltools-opengltk-1.5.6_rc2-glew.patch b/sci-chemistry/mgltools-opengltk/files/mgltools-opengltk-1.5.6_rc2-glew.patch
deleted file mode 100644
index 8e62dbb1a..000000000
--- a/sci-chemistry/mgltools-opengltk/files/mgltools-opengltk-1.5.6_rc2-glew.patch
+++ /dev/null
@@ -1,16 +0,0 @@
- setup.py |    2 +-
- 1 files changed, 1 insertions(+), 1 deletions(-)
-
-diff --git a/setup.py b/setup.py
-index 21f893f..ca5ec85 100644
---- a/setup.py
-+++ b/setup.py
-@@ -615,7 +615,7 @@ elif platform == 'win32':
-     macros = [('WIN32', None)]
- else:
-     extra_link_args = ''
--    libraries = ''
-+    libraries = gl_libs
-     macros = []
- 
- glextlib_ext = MyExtension("extent._glextlib",

diff --git a/sci-chemistry/mgltools-opengltk/files/mgltools-opengltk-1.5.6_rc2-unbundle.patch b/sci-chemistry/mgltools-opengltk/files/mgltools-opengltk-1.5.6_rc2-unbundle.patch
deleted file mode 100644
index 3b03fc0c5..000000000
--- a/sci-chemistry/mgltools-opengltk/files/mgltools-opengltk-1.5.6_rc2-unbundle.patch
+++ /dev/null
@@ -1,28 +0,0 @@
- setup.py |    7 ++-----
- 1 files changed, 2 insertions(+), 5 deletions(-)
-
-diff --git a/setup.py b/setup.py
-index 0191ba2..bda3e41 100644
---- a/setup.py
-+++ b/setup.py
-@@ -268,9 +268,6 @@ class build_EXT(build_ext):
-                     if path.isfile(statlib1) and path.isfile(statlib2):
-                         self.spawn(["ranlib", "-s", statlib1])
-                         self.spawn(["ranlib", "-s", statlib2])
--            togl_build(self,self.include_dirs,
--                       self.library_dirs,
--                       togl_libs)
-         #if platform in ["linux2", "win32"]:
-         if os.name in ['nt']:
-             tkdnd_build(self)
-@@ -716,8 +713,8 @@ glxlib_ext = MyExtension("extent._glxlib",
-                            ], #sources
-                           define_macros = macros,
-                           include_dirs = glx_incldirs,
--                          library_dirs = glx_libdirs,
--                          libraries = ['X11'] + gl_libs,
-+                          library_dirs = glx_libdirs + ['@GENTOO_PORTAGE_EPREFIX@/usr/lib64/Togl2.0/'],
-+                          libraries = ['X11', 'GLEW', 'GLEWmx'] + gl_libs,
-                           headers = {
-                              'name': path.join("GL","glx.h"),
-                              'dir': h_dir,

diff --git a/sci-chemistry/mgltools-opengltk/metadata.xml b/sci-chemistry/mgltools-opengltk/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-opengltk/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-opengltk/mgltools-opengltk-1.5.6.ebuild b/sci-chemistry/mgltools-opengltk/mgltools-opengltk-1.5.6.ebuild
deleted file mode 100644
index 598039d5a..000000000
--- a/sci-chemistry/mgltools-opengltk/mgltools-opengltk-1.5.6.ebuild
+++ /dev/null
@@ -1,60 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils prefix
-
-MY_PN="opengltk"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- opengltk"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="
-	dev-lang/tk:0
-	dev-python/numpy[${PYTHON_USEDEP}]
-	dev-tcltk/tkdnd
-	dev-tcltk/togl:0
-	media-libs/glew:0=
-	virtual/opengl"
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	local tcl_ver="$(best_version dev-lang/tcl | cut -d- -f3 | cut -d. -f1,2)"
-
-	local PATCHES=( "${FILESDIR}"/${PN}-1.5.6_rc2-unbundle.patch )
-
-	eprefixify setup.py
-
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-	find Togl2.0 tkdnd2.0 include/tcltk84 -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-
-	sed \
-		-e "s:8.4:${tcl_ver}:g" \
-		-e "s:8.5:${tcl_ver}:g" \
-		-i setup.py || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-pmv/files/mgltools-pmv-1.5.6_rc2-code-fix.patch b/sci-chemistry/mgltools-pmv/files/mgltools-pmv-1.5.6_rc2-code-fix.patch
deleted file mode 100644
index 10e2d3b96..000000000
--- a/sci-chemistry/mgltools-pmv/files/mgltools-pmv-1.5.6_rc2-code-fix.patch
+++ /dev/null
@@ -1,66 +0,0 @@
- .../blender/plugin/blenderPmvClientGUI.py          |    2 +-
- .../cinema4d/plugin/epmv_c4d_plugin.py             |    2 +-
- Pmv/hostappInterface/cinema4d/test/energy_test.py  |    4 ++--
- Pmv/styles/sessionToStyle.py                       |    3 +--
- 4 files changed, 5 insertions(+), 6 deletions(-)
-
-diff --git a/Pmv/hostappInterface/blender/plugin/blenderPmvClientGUI.py b/Pmv/hostappInterface/blender/plugin/blenderPmvClientGUI.py
-index 68e09c0..d52b17d 100644
---- a/Pmv/hostappInterface/blender/plugin/blenderPmvClientGUI.py
-+++ b/Pmv/hostappInterface/blender/plugin/blenderPmvClientGUI.py
-@@ -46,7 +46,7 @@ interface...
- import math
- import sys
- 
--MGL_ROOT=   #'/Library/MGLTools/1.5.6.csv'
-+MGL_ROOT= ""   #'/Library/MGLTools/1.5.6.csv'
- sys.path[0]=(MGL_ROOT+'/lib/python2.5/site-packages')
- sys.path.append(MGL_ROOT+'/lib/python2.5/site-packages/PIL')
- sys.path.append(MGL_ROOT+'/MGLToolsPckgs')
-diff --git a/Pmv/hostappInterface/cinema4d/plugin/epmv_c4d_plugin.py b/Pmv/hostappInterface/cinema4d/plugin/epmv_c4d_plugin.py
-index 42617e3..6087cd0 100644
---- a/Pmv/hostappInterface/cinema4d/plugin/epmv_c4d_plugin.py
-+++ b/Pmv/hostappInterface/cinema4d/plugin/epmv_c4d_plugin.py
-@@ -38,7 +38,7 @@ __version__="v0.1.1a"
- # ***** END GPL LICENCE BLOCK ***** 
- # -------------------------------------------------------------------------- 
-     
--MGL_ROOT=
-+MGL_ROOT= ""
- 
- #TODO:
- #make the pyrosetta extension
-diff --git a/Pmv/hostappInterface/cinema4d/test/energy_test.py b/Pmv/hostappInterface/cinema4d/test/energy_test.py
-index 9393e25..c5f83c9 100644
---- a/Pmv/hostappInterface/cinema4d/test/energy_test.py
-+++ b/Pmv/hostappInterface/cinema4d/test/energy_test.py
-@@ -56,7 +56,7 @@ c = self.md_Amber94
- #call md_Amber94 command
- #c('mdtest5', 349, callback=1, filename='0', log=0, callback_freq=10)
- import thread
--thread.start_new(c,('mdtest5', 349, callback=1, filename='0', log=0, callback_freq=10))
-+thread.start_new_thread(c,'mdtest5', 349, callback=1, filename='0', log=0, callback_freq=10)
- thr = MyThread()#c,'mdtest5', 349, callback=1, filename='0', log=0, callback_freq=10)
- thr.start(back=True)
- #do some other operations here
-@@ -101,4 +101,4 @@ for mode in modes:
- 
- 
- # Show animation of the first non-trivial mode 
--view(modes[6])
-\ No newline at end of file
-+view(modes[6])
-diff --git a/Pmv/styles/sessionToStyle.py b/Pmv/styles/sessionToStyle.py
-index 013bae1..4b0db48 100644
---- a/Pmv/styles/sessionToStyle.py
-+++ b/Pmv/styles/sessionToStyle.py
-@@ -14,8 +14,7 @@ name, ext = os.path.splitext(filename)
- f = open(name+'_style.py', 'w')
- f.write("numberOfMolecules = 1\n\n")
- 
--f.write("__doc__ = """Style_01: Applies to X molecules. It displays ..
--"""\n")
-+f.write('__doc__ = """Style_01: Applies to X molecules. It displays .."""\n')
- 
- f.write("def applyStyle(mv, molName):\n")
- f.write("    mode='both'\n")

diff --git a/sci-chemistry/mgltools-pmv/metadata.xml b/sci-chemistry/mgltools-pmv/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-pmv/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-pmv/mgltools-pmv-1.5.6.ebuild b/sci-chemistry/mgltools-pmv/mgltools-pmv-1.5.6.ebuild
deleted file mode 100644
index 405ab74be..000000000
--- a/sci-chemistry/mgltools-pmv/mgltools-pmv-1.5.6.ebuild
+++ /dev/null
@@ -1,52 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="Pmv"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- Pmv"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="
-	sci-chemistry/mgltools-dejavu[${PYTHON_USEDEP}]
-	sci-chemistry/mgltools-mglutil[${PYTHON_USEDEP}]
-	sci-chemistry/mgltools-molkit[${PYTHON_USEDEP}]
-	sci-chemistry/mgltools-opengltk[${PYTHON_USEDEP}]
-	sci-chemistry/mgltools-pybabel[${PYTHON_USEDEP}]
-	sci-chemistry/mgltools-support[${PYTHON_USEDEP}]
-	"
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-DOCS=( Pmv/RELNOTES Pmv/doc )
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	local PATCHES=( "${FILESDIR}"/${PN}-1.5.6_rc2-code-fix.patch )
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-pyautodock/metadata.xml b/sci-chemistry/mgltools-pyautodock/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-pyautodock/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-pyautodock/mgltools-pyautodock-1.5.6.ebuild b/sci-chemistry/mgltools-pyautodock/mgltools-pyautodock-1.5.6.ebuild
deleted file mode 100644
index 07f3dd8de..000000000
--- a/sci-chemistry/mgltools-pyautodock/mgltools-pyautodock-1.5.6.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="PyAutoDock"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- PyAutoDock"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND=""
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-pybabel/metadata.xml b/sci-chemistry/mgltools-pybabel/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-pybabel/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-pybabel/mgltools-pybabel-1.5.6.ebuild b/sci-chemistry/mgltools-pybabel/mgltools-pybabel-1.5.6.ebuild
deleted file mode 100644
index a619ad235..000000000
--- a/sci-chemistry/mgltools-pybabel/mgltools-pybabel-1.5.6.ebuild
+++ /dev/null
@@ -1,44 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="PyBabel"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- PyBabel"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND=""
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-DOCS=( PyBabel/RELNOTES )
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-pyglf/metadata.xml b/sci-chemistry/mgltools-pyglf/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-pyglf/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-pyglf/mgltools-pyglf-1.5.6.ebuild b/sci-chemistry/mgltools-pyglf/mgltools-pyglf-1.5.6.ebuild
deleted file mode 100644
index ddf51d228..000000000
--- a/sci-chemistry/mgltools-pyglf/mgltools-pyglf-1.5.6.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="pyglf"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- pyglf"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="dev-python/numpy[${PYTHON_USEDEP}]"
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-qslimlib/files/1.5.4-gcc4.3.patch b/sci-chemistry/mgltools-qslimlib/files/1.5.4-gcc4.3.patch
deleted file mode 100644
index 5305a9004..000000000
--- a/sci-chemistry/mgltools-qslimlib/files/1.5.4-gcc4.3.patch
+++ /dev/null
@@ -1,52 +0,0 @@
---- QSlimLib-1.5.4/src/mixkit/MxDynBlock.h	2009-05-18 22:04:02.783721647 +0200
-+++ QSlimLib-1.5.4/src/mixkit/MxDynBlock.h.new	2009-05-18 22:14:07.010554394 +0200
-@@ -35,7 +35,7 @@
- 
-     void room_for(int len)
-     {
--	if( length()<len ) resize(len);
-+	if( length()<len ) this->resize(len);
- 	fill = len;
-     }
- 
---- QSlimLib-1.5.4/src/mixkit/MxDynBlock.h	2009-05-18 22:20:40.238540252 +0200
-+++ QSlimLib-1.5.4/src/mixkit/MxDynBlock.h.new	2009-05-18 22:21:22.416124721 +0200
-@@ -62,8 +62,8 @@
-     //
-     int size() const { return length(); }
- 
--    typename MxBlock<T>::iterator end()       { return begin()+size(); }
--    typename MxBlock<T>::const_iterator end() const { return begin()+size(); }
-+    typename MxBlock<T>::iterator end()       { return this->begin()+size(); }
-+    typename MxBlock<T>::const_iterator end() const { return this->begin()+size(); }
- 
-     void push_back(const T& t) { add(t); }
- };
---- QSlimLib-1.5.4/src/mixkit/MxStack.h	2004-10-25 23:02:10.000000000 +0200
-+++ QSlimLib-1.5.4/src/mixkit/MxStack.h.new	2009-05-18 22:25:01.804175361 +0200
-@@ -26,12 +26,12 @@
-     MxStack(const T& val, unsigned int n) : MxDynBlock<T>(n)
- 	{ push(val); }
- 
--    T&       top()       { return last(); }
--    const T& top() const { return last(); }
-+    T&       top()       { return this->last(); }
-+    const T& top() const { return this->last(); }
- 
--    bool is_empty() { return length()==0; }
-+    bool is_empty() { return this->length()==0; }
- 
--    T& pop() { return drop(); }
-+    T& pop() { return this->drop(); }
- 
-     void push(const T& val) { add(val); }
-     //
-@@ -41,7 +41,7 @@
-     //       broken!  The top() will grab a pointer into the block,
-     //       but the add() may reallocate the block before doing the
-     //       assignment.  Thus, the pointer will become invalid.
--    void push() { add(); top() = (*this)[length()-2]; }
-+    void push() { this->add(); top() = (*this)[this->length()-2]; }
- };
- 
- // MXSTACK_INCLUDED

diff --git a/sci-chemistry/mgltools-qslimlib/files/1.5.4-gcc4.7.patch b/sci-chemistry/mgltools-qslimlib/files/1.5.4-gcc4.7.patch
deleted file mode 100644
index 5e94b74d1..000000000
--- a/sci-chemistry/mgltools-qslimlib/files/1.5.4-gcc4.7.patch
+++ /dev/null
@@ -1,30 +0,0 @@
- src/mixkit/MxDynBlock.h |    2 +-
- src/mixkit/MxStack.h    |    2 +-
- 2 files changed, 2 insertions(+), 2 deletions(-)
-
-diff --git a/src/mixkit/MxDynBlock.h b/src/mixkit/MxDynBlock.h
-index 51cc89b..4e313d2 100644
---- a/src/mixkit/MxDynBlock.h
-+++ b/src/mixkit/MxDynBlock.h
-@@ -41,7 +41,7 @@ public:
- 
-     T& add()
-     {
--	if( length()==total_space() )  resize(total_space() * 2);
-+	if( length()==total_space() )  this->resize(total_space() * 2);
- 	fill++;
- 	return last();
-     }
-diff --git a/src/mixkit/MxStack.h b/src/mixkit/MxStack.h
-index 9ed9a05..1275ddd 100644
---- a/src/mixkit/MxStack.h
-+++ b/src/mixkit/MxStack.h
-@@ -33,7 +33,7 @@ public:
- 
-     T& pop() { return this->drop(); }
- 
--    void push(const T& val) { add(val); }
-+    void push(const T& val) { this->add(val); }
-     //
-     // NOTE: In this code, it is *crucial* that we do the add() and
-     //       assignment in separate steps.  The obvious alternative

diff --git a/sci-chemistry/mgltools-qslimlib/metadata.xml b/sci-chemistry/mgltools-qslimlib/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-qslimlib/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-qslimlib/mgltools-qslimlib-1.5.6.ebuild b/sci-chemistry/mgltools-qslimlib/mgltools-qslimlib-1.5.6.ebuild
deleted file mode 100644
index e33e5f6fb..000000000
--- a/sci-chemistry/mgltools-qslimlib/mgltools-qslimlib-1.5.6.ebuild
+++ /dev/null
@@ -1,46 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="QSlimLib"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- QSlimLib"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="dev-python/numpy[${PYTHON_USEDEP}]"
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	local PATCHES=(
-		"${FILESDIR}"/1.5.4-gcc4.3.patch
-		"${FILESDIR}"/1.5.4-gcc4.7.patch
-		)
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-scenario2/metadata.xml b/sci-chemistry/mgltools-scenario2/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-scenario2/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-scenario2/mgltools-scenario2-1.5.6.ebuild b/sci-chemistry/mgltools-scenario2/mgltools-scenario2-1.5.6.ebuild
deleted file mode 100644
index 79d4c2583..000000000
--- a/sci-chemistry/mgltools-scenario2/mgltools-scenario2-1.5.6.ebuild
+++ /dev/null
@@ -1,45 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="Scenario2"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- Scenario2"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="
-	dev-python/simpy[${PYTHON_USEDEP}]
-	virtual/python-pmw[${PYTHON_USEDEP}]
-	"
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-sff/files/1.5.4-impl-dec.patch b/sci-chemistry/mgltools-sff/files/1.5.4-impl-dec.patch
deleted file mode 100644
index 253051992..000000000
--- a/sci-chemistry/mgltools-sff/files/1.5.4-impl-dec.patch
+++ /dev/null
@@ -1,12 +0,0 @@
-diff --git a/src/bhtree.c b/src/bhtree.c
-index 1db701a..cb16afb 100644
---- a/src/bhtree.c
-+++ b/src/bhtree.c
-@@ -38,6 +38,7 @@
- */
- #include <stdio.h>
- #include <math.h>
-+#include <stdlib.h>
- #include "bhtree.h"
- 
- /* Barnes - Hut Trees ? */

diff --git a/sci-chemistry/mgltools-sff/metadata.xml b/sci-chemistry/mgltools-sff/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-sff/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-sff/mgltools-sff-1.5.6.ebuild b/sci-chemistry/mgltools-sff/mgltools-sff-1.5.6.ebuild
deleted file mode 100644
index 6b81d92dc..000000000
--- a/sci-chemistry/mgltools-sff/mgltools-sff-1.5.6.ebuild
+++ /dev/null
@@ -1,43 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="sff"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- sff"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="dev-python/numpy[${PYTHON_USEDEP}]"
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	local PATCHES=( "${FILESDIR}"/1.5.4-impl-dec.patch )
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-support/metadata.xml b/sci-chemistry/mgltools-support/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-support/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-support/mgltools-support-1.5.6.ebuild b/sci-chemistry/mgltools-support/mgltools-support-1.5.6.ebuild
deleted file mode 100644
index c25bf8a46..000000000
--- a/sci-chemistry/mgltools-support/mgltools-support-1.5.6.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="Support"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- Support"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND=""
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-symserv/metadata.xml b/sci-chemistry/mgltools-symserv/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-symserv/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-symserv/mgltools-symserv-1.5.6.ebuild b/sci-chemistry/mgltools-symserv/mgltools-symserv-1.5.6.ebuild
deleted file mode 100644
index 9c1f2c8e2..000000000
--- a/sci-chemistry/mgltools-symserv/mgltools-symserv-1.5.6.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="symserv"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- symserv"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND=""
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-utpackages/files/1.5.4-gcc4.3.patch b/sci-chemistry/mgltools-utpackages/files/1.5.4-gcc4.3.patch
deleted file mode 100644
index 24984b360..000000000
--- a/sci-chemistry/mgltools-utpackages/files/1.5.4-gcc4.3.patch
+++ /dev/null
@@ -1,11 +0,0 @@
---- UTpackages-1.5.4/UTisocontourDIST/src/queue.h	2004-06-16 21:46:53.000000000 +0200
-+++ UTpackages-1.5.4/UTisocontourDIST/src/queue.h.new	2009-05-28 21:40:02.000000000 +0200
-@@ -17,7 +17,7 @@
- #define __QUEUE_H
- 
- #include "utilities.h"
--
-+#include <algorithm>
- 
- //@ManMemo: A templated FIFO queue
- /*@Doc: Implementation of a FIFO queue based on a circular array.

diff --git a/sci-chemistry/mgltools-utpackages/metadata.xml b/sci-chemistry/mgltools-utpackages/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-utpackages/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-utpackages/mgltools-utpackages-1.5.6.ebuild b/sci-chemistry/mgltools-utpackages/mgltools-utpackages-1.5.6.ebuild
deleted file mode 100644
index e8fbc41e6..000000000
--- a/sci-chemistry/mgltools-utpackages/mgltools-utpackages-1.5.6.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="UTpackages"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- UTpackages"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1 UTPackages"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="dev-python/numpy[${PYTHON_USEDEP}]"
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-viewer-framework/metadata.xml b/sci-chemistry/mgltools-viewer-framework/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-viewer-framework/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-viewer-framework/mgltools-viewer-framework-1.5.6.ebuild b/sci-chemistry/mgltools-viewer-framework/mgltools-viewer-framework-1.5.6.ebuild
deleted file mode 100644
index eabcc214f..000000000
--- a/sci-chemistry/mgltools-viewer-framework/mgltools-viewer-framework-1.5.6.ebuild
+++ /dev/null
@@ -1,47 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="ViewerFramework"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- ViewerFramework"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND=""
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-DOCS=( ViewerFramework/RELNOTES )
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	sed \
-		-e '/__debug__/d' \
-		-i ViewerFramework/VF.py || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-vision/metadata.xml b/sci-chemistry/mgltools-vision/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-vision/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-vision/mgltools-vision-1.5.6.ebuild b/sci-chemistry/mgltools-vision/mgltools-vision-1.5.6.ebuild
deleted file mode 100644
index f50816ffd..000000000
--- a/sci-chemistry/mgltools-vision/mgltools-vision-1.5.6.ebuild
+++ /dev/null
@@ -1,53 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="Vision"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- Vision"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="dev-python/matplotlib[tk,${PYTHON_USEDEP}]"
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-DOCS=( Vision/FAQ.txt )
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}
-
-python_install_all() {
-	distutils-r1_python_install_all
-
-	sed '1s:^.*$:#!/usr/bin/python:g' -i Vision/bin/runVision || die
-	dobin Vision/bin/runVision
-
-	dohtml Vision/FAQ.html
-}

diff --git a/sci-chemistry/mgltools-visionlib/metadata.xml b/sci-chemistry/mgltools-visionlib/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-visionlib/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-visionlib/mgltools-visionlib-1.5.6.ebuild b/sci-chemistry/mgltools-visionlib/mgltools-visionlib-1.5.6.ebuild
deleted file mode 100644
index e141c98a9..000000000
--- a/sci-chemistry/mgltools-visionlib/mgltools-visionlib-1.5.6.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="VisionLibraries"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- VisionLibraries"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND=""
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-volume/metadata.xml b/sci-chemistry/mgltools-volume/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-volume/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-volume/mgltools-volume-1.5.6.ebuild b/sci-chemistry/mgltools-volume/mgltools-volume-1.5.6.ebuild
deleted file mode 100644
index 33dbaaac8..000000000
--- a/sci-chemistry/mgltools-volume/mgltools-volume-1.5.6.ebuild
+++ /dev/null
@@ -1,44 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="Volume"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- Volume"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND=""
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-DOCS=( Volume/RELNOTES Volume/README Volume/TODO )
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}

diff --git a/sci-chemistry/mgltools-webservices/metadata.xml b/sci-chemistry/mgltools-webservices/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/mgltools-webservices/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@g.o</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-chemistry/mgltools-webservices/mgltools-webservices-1.5.6.ebuild b/sci-chemistry/mgltools-webservices/mgltools-webservices-1.5.6.ebuild
deleted file mode 100644
index 82aea5667..000000000
--- a/sci-chemistry/mgltools-webservices/mgltools-webservices-1.5.6.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils
-
-MY_PN="WebServices"
-MY_P="${MY_PN}-${PV/_rc3/}"
-
-DESCRIPTION="MGLTools Plugin -- WebServices"
-HOMEPAGE="http://mgltools.scripps.edu"
-SRC_URI="http://mgltools.scripps.edu/downloads/tars/releases/REL${PV}/mgltools_source_${PV}.tar.gz"
-
-LICENSE="MGLTOOLS MPL-1.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="dev-python/zsi[${PYTHON_USEDEP}]"
-DEPEND="${RDEPEND}
-	dev-lang/swig"
-
-S="${WORKDIR}"/${MY_P}
-
-src_unpack() {
-	tar xzpf "${DISTDIR}"/${A} mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-	tar xzpf mgltools_source_${PV/_/}/MGLPACKS/${MY_P}.tar.gz || die
-}
-
-python_prepare_all() {
-	ecvs_clean
-	find "${S}" -name LICENSE -type f -delete || die
-
-	sed  \
-		-e 's:^.*CVS:#&1:g' \
-		-e 's:^.*LICENSE:#&1:g' \
-		-i "${S}"/MANIFEST.in || die
-	distutils-r1_python_prepare_all
-}