Get Gentoo!
gentoo.org sites
gentoo.org Wiki Bugs Forums Packages
Planet Archives Sources
Infra Status

Gentoo Archives: gentoo-commits

From: "Justin Lecher (jlec)" <jlec@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] gentoo-x86 commit in sci-chemistry/pymol: ChangeLog pymol-1.4.1.ebuild pymol-1.4_beta1.ebuild pymol-1.3.0.ebuild pymol-1.3.1_pre3924.ebuild
Date: Fri, 06 May 2011 07:59:41
Message-Id: 20110506075931.BA19320054@flycatcher.gentoo.org
1 jlec 11/05/06 07:59:31
2
3 Modified: ChangeLog
4 Added: pymol-1.4.1.ebuild
5 Removed: pymol-1.4_beta1.ebuild pymol-1.3.0.ebuild
6 pymol-1.3.1_pre3924.ebuild
7 Log:
8 Version Bump, notified by euscan; cleaned old
9
10 (Portage version: 2.2.0_alpha31/cvs/Linux x86_64)
11
12 Revision Changes Path
13 1.78 sci-chemistry/pymol/ChangeLog
14
15 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/ChangeLog?rev=1.78&view=markup
16 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/ChangeLog?rev=1.78&content-type=text/plain
17 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/ChangeLog?r1=1.77&r2=1.78
18
19 Index: ChangeLog
20 ===================================================================
21 RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v
22 retrieving revision 1.77
23 retrieving revision 1.78
24 diff -u -r1.77 -r1.78
25 --- ChangeLog 5 Apr 2011 06:39:25 -0000 1.77
26 +++ ChangeLog 6 May 2011 07:59:31 -0000 1.78
27 @@ -1,6 +1,13 @@
28 # ChangeLog for sci-chemistry/pymol
29 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
30 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.77 2011/04/05 06:39:25 jlec Exp $
31 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.78 2011/05/06 07:59:31 jlec Exp $
32 +
33 +*pymol-1.4.1 (06 May 2011)
34 +
35 + 06 May 2011; Justin Lecher <jlec@g.o> +files/1.4.1-data-path.patch,
36 + -pymol-1.3.0.ebuild, -pymol-1.3.1_pre3924.ebuild, -pymol-1.4_beta1.ebuild,
37 + +pymol-1.4.1.ebuild, +files/1.4.1-shaders.patch:
38 + Version Bump, notified by euscan; cleaned old
39
40 05 Apr 2011; Justin Lecher <jlec@g.o> pymol-1.4_beta1.ebuild:
41 Cleaned unneeded SRC_URI entries
42
43
44
45 1.1 sci-chemistry/pymol/pymol-1.4.1.ebuild
46
47 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/pymol-1.4.1.ebuild?rev=1.1&view=markup
48 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/pymol-1.4.1.ebuild?rev=1.1&content-type=text/plain
49
50 Index: pymol-1.4.1.ebuild
51 ===================================================================
52 # Copyright 1999-2011 Gentoo Foundation
53 # Distributed under the terms of the GNU General Public License v2
54 # $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/pymol-1.4.1.ebuild,v 1.1 2011/05/06 07:59:31 jlec Exp $
55
56 EAPI="3"
57
58 PYTHON_DEPEND="2:2.6"
59 SUPPORT_PYTHON_ABIS="1"
60 RESTRICT_PYTHON_ABIS="2.4 2.5 3.*"
61 PYTHON_USE_WITH="tk"
62 PYTHON_MODNAME="${PN} chempy pmg_tk pmg_wx"
63
64 inherit eutils distutils prefix versionator
65
66 DESCRIPTION="A Python-extensible molecular graphics system."
67 HOMEPAGE="http://pymol.sourceforge.net/"
68 SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
69
70 LICENSE="PSF-2.2"
71 SLOT="0"
72 KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux"
73 IUSE="apbs numpy vmd"
74
75 DEPEND="
76 dev-python/numpy
77 dev-python/pmw
78 media-libs/freetype:2
79 media-libs/glew
80 media-libs/libpng
81 media-video/mpeg-tools
82 sys-libs/zlib
83 media-libs/freeglut
84 apbs? (
85 dev-libs/maloc
86 sci-chemistry/apbs
87 sci-chemistry/pdb2pqr
88 sci-chemistry/pymol-apbs-plugin
89 )"
90 RDEPEND="${DEPEND}"
91
92 src_prepare() {
93 epatch \
94 "${FILESDIR}"/${PV}-data-path.patch \
95 "${FILESDIR}"/${PV}-shaders.patch
96
97 epatch "${FILESDIR}"/1.2.2-prefix.patch && \
98 eprefixify setup.py
99
100 # Turn off splash screen. Please do make a project contribution
101 # if you are able though. #299020
102 epatch "${FILESDIR}"/1.2.1/nosplash-gentoo.patch
103
104 # Respect CFLAGS
105 sed -i \
106 -e "s:\(ext_comp_args=\).*:\1[]:g" \
107 "${S}"/setup.py || die "Failed running sed on setup.py"
108
109 use vmd && epatch "${FILESDIR}"/$(get_version_component_range 1-2)-vmd.patch
110
111 use numpy && \
112 sed \
113 -e '/PYMOL_NUMPY/s:^#::g' \
114 -i setup.py
115
116 rm ./modules/pmg_tk/startup/apbs_tools.py || die
117
118 # python 3.* fix
119 # sed '452,465d' -i setup.py
120 distutils_src_prepare
121 }
122
123 src_configure() {
124 :
125 }
126
127 src_install() {
128 distutils_src_install
129
130 # These environment variables should not go in the wrapper script, or else
131 # it will be impossible to use the PyMOL libraries from Python.
132 cat >> "${T}"/20pymol <<- EOF
133 PYMOL_PATH="${EPREFIX}/$(python_get_sitedir -f)/${PN}"
134 PYMOL_DATA="${EPREFIX}/usr/share/pymol/data"
135 PYMOL_SCRIPTS="${EPREFIX}/usr/share/pymol/scripts"
136 EOF
137
138 doenvd "${T}"/20pymol || die "Failed to install env.d file."
139
140 cat >> "${T}"/pymol <<- EOF
141 #!/bin/sh
142 $(PYTHON -f) -O \${PYMOL_PATH}/__init__.py \$*
143 EOF
144
145 dobin "${T}"/pymol || die "Failed to install wrapper."
146
147 insinto /usr/share/pymol
148 doins -r test data scripts || die "no shared data"
149
150 insinto /usr/share/pymol/examples
151 doins -r examples || die "Failed to install docs."
152
153 dodoc DEVELOPERS README || die "Failed to install docs."
154 }
155
156 pkg_postinst() {
157 elog "\t USE=shaders was removed,"
158 elog "please use pymol config settings"
159 elog "\t set use_shaders, 1"
160 distutils_pkg_postinst
161 }
Report Message
Find on MARC Find on Google Groups