[gentoo-commits] gentoo-x86 commit in sci-biology/clustalw: ChangeLog clustalw-1.83-r2.ebuild clustalw-1.83-r1.ebuild

[Olivier Fisette (ribosome)]

ribosome    08/08/27 22:51:42

  Modified:             ChangeLog
  Added:                clustalw-1.83-r2.ebuild
  Removed:              clustalw-1.83-r1.ebuild
  Log:
  Forcing bump to start using slots.
  (Portage version: 2.1.4.4, RepoMan options: --force)

Revision  Changes    Path
1.12                 sci-biology/clustalw/ChangeLog

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/clustalw/ChangeLog?rev=1.12&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/clustalw/ChangeLog?rev=1.12&content-type=text/plain
diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/clustalw/ChangeLog?r1=1.11&r2=1.12

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/clustalw/ChangeLog,v
retrieving revision 1.11
retrieving revision 1.12
diff -u -r1.11 -r1.12
--- ChangeLog	2 Nov 2006 19:06:41 -0000	1.11
+++ ChangeLog	27 Aug 2008 22:51:42 -0000	1.12
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/clustalw
-# Copyright 2000-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalw/ChangeLog,v 1.11 2006/11/02 19:06:41 grobian Exp $
+# Copyright 2000-2008 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalw/ChangeLog,v 1.12 2008/08/27 22:51:42 ribosome Exp $
+
+*clustalw-1.83-r2 (27 Aug 2008)
+
+  27 Aug 2008; Olivier Fisette <ribosome@g.o>
+  -clustalw-1.83-r1.ebuild, +clustalw-1.83-r2.ebuild:
+  Forcing bump to start using slots as ClustalW 2 should coexist with 1.83.
 
   02 Nov 2006; Fabian Groffen <grobian@g.o> clustalw-1.83-r1.ebuild:
   Dropped ppc-macos, see you in prefix.



1.1                  sci-biology/clustalw/clustalw-1.83-r2.ebuild

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/clustalw/clustalw-1.83-r2.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/clustalw/clustalw-1.83-r2.ebuild?rev=1.1&content-type=text/plain

Index: clustalw-1.83-r2.ebuild
===================================================================
# Copyright 1999-2008 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalw/clustalw-1.83-r2.ebuild,v 1.1 2008/08/27 22:51:42 ribosome Exp $

inherit toolchain-funcs

DESCRIPTION="General purpose multiple alignment program for DNA and proteins"
HOMEPAGE="http://www.embl-heidelberg.de/~seqanal/"
SRC_URI="ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/${PN}${PV}.UNIX.tar.gz"

LICENSE="clustalw"
SLOT="1"
KEYWORDS="alpha amd64 ppc ppc64 sparc x86"
IUSE=""

S="${WORKDIR}"/${PN}${PV}

src_unpack(){
	unpack ${A}
	cd "${S}"
	sed -i -e "s/CC	= cc/CC	= $(tc-getCC)/" \
		-e "s/CFLAGS  = -c -O/CFLAGS  = -c ${CFLAGS}/" \
		-e "s/LFLAGS	= -O -lm/LFLAGS	= -lm ${CFLAGS}/" makefile || die
	sed -i -e "s%clustalw_help%/usr/share/doc/${PF}/clustalw_help%" clustalw.c || die
}

src_compile() {
	emake || die
}

src_install() {
	dobin clustalw || die
	dodoc README clustalv.doc clustalw.doc clustalw.ms
	insinto /usr/share/doc/${PF}
	doins clustalw_help
}