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commit: 087966e83658833cb4b436d828c3c0d3519cd5e4 |
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Author: Andreas K. Hüttel <dilfridge <AT> gentoo <DOT> org> |
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AuthorDate: Mon Dec 28 20:02:49 2015 +0000 |
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Commit: Andreas Hüttel <dilfridge <AT> gentoo <DOT> org> |
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CommitDate: Mon Dec 28 20:08:36 2015 +0000 |
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URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=087966e8 |
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|
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dev-perl/Bio-SamTools: Version bump; remove old |
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|
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Package-Manager: portage-2.2.26 |
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|
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...ls-1.390.0-r1.ebuild => Bio-SamTools-1.420.0.ebuild} | 17 +++++++++-------- |
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dev-perl/Bio-SamTools/Manifest | 2 +- |
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2 files changed, 10 insertions(+), 9 deletions(-) |
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|
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diff --git a/dev-perl/Bio-SamTools/Bio-SamTools-1.390.0-r1.ebuild b/dev-perl/Bio-SamTools/Bio-SamTools-1.420.0.ebuild |
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similarity index 77% |
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rename from dev-perl/Bio-SamTools/Bio-SamTools-1.390.0-r1.ebuild |
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rename to dev-perl/Bio-SamTools/Bio-SamTools-1.420.0.ebuild |
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index 1ad7fbe..68d7383 100644 |
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--- a/dev-perl/Bio-SamTools/Bio-SamTools-1.390.0-r1.ebuild |
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+++ b/dev-perl/Bio-SamTools/Bio-SamTools-1.420.0.ebuild |
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@@ -2,11 +2,10 @@ |
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# Distributed under the terms of the GNU General Public License v2 |
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# $Id$ |
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|
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-EAPI=5 |
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- |
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-MODULE_AUTHOR=LDS |
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-MODULE_VERSION=1.39 |
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+EAPI=6 |
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|
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+DIST_AUTHOR=LDS |
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+DIST_VERSION=1.42 |
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inherit perl-module toolchain-funcs |
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|
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DESCRIPTION="Read SAM/BAM database files" |
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@@ -14,20 +13,22 @@ DESCRIPTION="Read SAM/BAM database files" |
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SLOT="0" |
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KEYWORDS="~amd64 ~x86" |
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IUSE="" |
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+LICENSE="|| ( Apache-2.0 Artistic-2 GPL-1+ )" |
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|
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RDEPEND=" |
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- sci-biology/bioperl |
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+ >=sci-biology/bioperl-1.6.9 |
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>=sci-biology/samtools-1 |
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" |
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DEPEND="${RDEPEND} |
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virtual/perl-ExtUtils-CBuilder |
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- dev-perl/Module-Build |
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+ >=dev-perl/Module-Build-0.420.0 |
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" |
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|
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-SRC_TEST=do |
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+DIST_TEST=skip |
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+# cannot load its own library, fundamentally b0rken |
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|
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PATCHES=( |
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- "${FILESDIR}"/${P}-samtools-1.patch |
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+ "${FILESDIR}"/${PN}-1.390.0-samtools-1.patch |
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) |
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|
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src_prepare() { |
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|
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diff --git a/dev-perl/Bio-SamTools/Manifest b/dev-perl/Bio-SamTools/Manifest |
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index bf52deb..9143d80 100644 |
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--- a/dev-perl/Bio-SamTools/Manifest |
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+++ b/dev-perl/Bio-SamTools/Manifest |
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@@ -1,2 +1,2 @@ |
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-DIST Bio-SamTools-1.39.tar.gz 331515 SHA256 a2baaa0f569c2b49e988978a121fb210fcb35200dcb2f183aa58bb03d711ef4f SHA512 aff502af24239cd64dec3a5a9cb6ab7280661f277cef066f79c87f608112d5870f46ffcc81f3bc2382f48d5247c7ab5de35e4afaa7ca4e286b0323978368d668 WHIRLPOOL db069d76fe386354b8cec60527de6612fc501428e9775e02574955cead3eba55db169697aaacc22c3b4df6475c6ecb72486b94c9b577da1deb42dc5c3791b04f |
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DIST Bio-SamTools-1.41.tar.gz 338745 SHA256 b5d7ca16c96cc9fbee5daceb3268f36011740fe4de92074c17a729bac57c3077 SHA512 6f822cd219ecf86e95bc3a6bde1aebbe5eb8284b21b07ca919618c1422c37e6d182285d1a5e77848c6d5cea0dc74a51705f6bc1a27d44aeeaaa69f1cea58f147 WHIRLPOOL b651ea5059ea46ab5e31d237d3e52d7936921470bbd04133be70f935a47b913dc7f3b154c14d1af52f0ba2f5afc6878a27d88e4bbf9d39023cf786bca70f6696 |
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+DIST Bio-SamTools-1.42.tar.gz 337821 SHA256 ef4b736e86442ce61f56ddd94befc302ccc4646cae3c45407e107400c703584c SHA512 6a1f95104ce91a800a314c304915af9d6e1cc477c7d5f42b640d0a27b18cd32c4ad9e261cac5556f4863652570a3c573d34245963fc4b9ade067981b2a329271 WHIRLPOOL 5a216e51173ee5a9a930013718452bcbfbcffe1aa1663f50d567daf17378a50135b1b0b6d750c9aece05de268e730faf6c54963823c037559fb50ed95dda32c7 |
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