[gentoo-commits] gentoo-x86 commit in sci-chemistry/apbs: ChangeLog apbs-1.0.0.ebuild

[Markus Dittrich (markusle)]

markusle    08/04/29 22:21:19

  Modified:             ChangeLog
  Added:                apbs-1.0.0.ebuild
  Log:
  Version bump (fixes bug #219599). Changed license to BSD since it most closely matches the apbs license.
  (Portage version: 2.1.5_rc6)

Revision  Changes    Path
1.18                 sci-chemistry/apbs/ChangeLog

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/ChangeLog?rev=1.18&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/ChangeLog?rev=1.18&content-type=text/plain
diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/ChangeLog?r1=1.17&r2=1.18

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v
retrieving revision 1.17
retrieving revision 1.18
diff -u -r1.17 -r1.18
--- ChangeLog	23 Mar 2008 11:39:18 -0000	1.17
+++ ChangeLog	29 Apr 2008 22:21:19 -0000	1.18
@@ -1,6 +1,15 @@
 # ChangeLog for sci-chemistry/apbs
 # Copyright 1999-2008 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.17 2008/03/23 11:39:18 markusle Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.18 2008/04/29 22:21:19 markusle Exp $
+
+*apbs-1.0.0 (29 Apr 2008)
+
+  29 Apr 2008; Markus Dittrich <markusle@g.o>
+  +files/apbs-1.0.0-install-fix.patch,
+  +files/apbs-1.0.0-libmaloc-noinstall.patch,
+  +files/apbs-1.0.0-openmpi.patch, +apbs-1.0.0.ebuild:
+  Version bump (fixes bug #219599). Changed license to BSD since
+  it most closely matches the apbs license.
 
   23 Mar 2008; Markus Dittrich <markusle@g.o> apbs-0.5.1.ebuild:
   Changed to unversioned install location in /usr/share (see bug #213616).



1.1                  sci-chemistry/apbs/apbs-1.0.0.ebuild

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/apbs-1.0.0.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/apbs-1.0.0.ebuild?rev=1.1&content-type=text/plain

Index: apbs-1.0.0.ebuild
===================================================================
# Copyright 1999-2008 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.0.0.ebuild,v 1.1 2008/04/29 22:21:19 markusle Exp $

inherit eutils fortran autotools

MY_P="${P}-source"
S="${WORKDIR}"/"${MY_P}"

DESCRIPTION=" Software for evaluating the electrostatic properties of nanoscale biomolecular systems"
LICENSE="BSD"
HOMEPAGE="http://agave.wustl.edu/apbs/"
SRC_URI="mirror://sourceforge/${PN}/${MY_P}.tar.gz"

SLOT="0"
IUSE="blas mpi python doc"
KEYWORDS="~ppc ~x86 ~amd64"

DEPEND="blas? ( virtual/blas )
		python? ( dev-lang/python )
		sys-libs/readline
		mpi? ( virtual/mpi )"

FORTRAN="g77 gfortran"

pkg_setup() {
	# It is important that you use the same compiler to compile
	# APBS that you used when compiling MPI.
	fortran_pkg_setup
}

src_unpack() {
	unpack ${A}
	cd "${S}"
	epatch "${FILESDIR}"/${P}-openmpi.patch
	epatch "${FILESDIR}"/${P}-install-fix.patch
	epatch "${FILESDIR}"/${P}-libmaloc-noinstall.patch

	sed -e "s:GENTOO_PKG_NAME:${PN}:" -i Makefile.am \
		|| die "Failed to fix Makefile.am"

	eautoreconf
}

src_compile() {
	local myconf
	use blas && myconf="${myconf} --with-blas=-lblas"

	# check which mpi version is installed and tell configure
	if use mpi; then
		if has_version sys-cluster/mpich; then
	 		myconf="${myconf} --with-mpich=/usr"
		elif has_version sys-cluster/mpich2; then
			myconf="${myconf} --with-mpich2=/usr"
		elif has_version sys-cluster/lam-mpi; then
			myconf="${myconf} --with-lam=/usr"
		elif has_version sys-cluster/openmpi; then
			myconf="${myconf} --with-openmpi=/usr"
		fi
	fi || die "Failed to select proper mpi implementation"

	econf $(use_enable python) \
		${myconf} || die "configure failed"

	emake -j1 || die "make failed"
}

src_test() {
	cd examples && make test \
		|| die "Tests failed"
}


src_install() {
	make DESTDIR="${D}" install || die "make install failed"
}



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