[gentoo-commits] proj/sci:master commit in: sci-biology/trim_galore/

[Martin Mokrejs]

commit:     2ae4310a77950f476976a7556b8291a1ad8291ba
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sun Mar 23 17:08:10 2014 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Sun Mar 23 17:08:10 2014 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=2ae4310a

sci-biology/trim_galore: a skeleton for a new package, needs sci-biology/fastqc to move ahead

Package-Manager: portage-2.2.7

---
 sci-biology/trim_galore/ChangeLog                | 10 ++++++++++
 sci-biology/trim_galore/metadata.xml             |  9 +++++++++
 sci-biology/trim_galore/trim_galore-0.3.3.ebuild | 20 ++++++++++++++++++++
 3 files changed, 39 insertions(+)

diff --git a/sci-biology/trim_galore/ChangeLog b/sci-biology/trim_galore/ChangeLog
new file mode 100644
index 0000000..3dba931
--- /dev/null
+++ b/sci-biology/trim_galore/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-biology/trim_galore
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*trim_galore-0.3.3 (23 Mar 2014)
+
+  23 Mar 2014; Martin Mokrejs <mmokrejs@×××××××××××××××.cz> +metadata.xml,
+  +trim_galore-0.3.3.ebuild:
+  sci-biology/trim_galore: a skeleton for a new package, needs sci-
+  biology/fastqc to move ahead

diff --git a/sci-biology/trim_galore/metadata.xml b/sci-biology/trim_galore/metadata.xml
new file mode 100644
index 0000000..07b5255
--- /dev/null
+++ b/sci-biology/trim_galore/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+	<herd>sci-biology</herd>
+	<maintainer>
+		<email>mmokrejs@×××××××××××××××.cz</email>
+		<name>Martin Mokrejs</name>
+	</maintainer>
+</pkgmetadata>

diff --git a/sci-biology/trim_galore/trim_galore-0.3.3.ebuild b/sci-biology/trim_galore/trim_galore-0.3.3.ebuild
new file mode 100644
index 0000000..258ee38
--- /dev/null
+++ b/sci-biology/trim_galore/trim_galore-0.3.3.ebuild
@@ -0,0 +1,20 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+DESCRIPTION="Wrapper around Cutadapt and FastQC to consistently apply quality and adapter trimming"
+HOMEPAGE="http://www.bioinformatics.babraham.ac.uk/projects/trim_galore/"
+SRC_URI="http://www.bioinformatics.babraham.ac.uk/projects/trim_galore/trim_galore_v0.3.3.zip"
+
+LICENSE="GPL-3"
+SLOT="0"
+KEYWORDS=""
+IUSE=""
+
+DEPEND=""
+RDEPEND="
+	sci-biology/cutadapt
+	sci-biology/fastqc
+	${DEPEND}"