Gentoo Archives: gentoo-commits

From: Justin Lecher <jlec@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/reduce/
Date: Sat, 29 Apr 2017 18:49:44
Message-Id: 1493491755.54d6388c021c1207a53995aec27733b381b94243.jlec@gentoo
1 commit: 54d6388c021c1207a53995aec27733b381b94243
2 Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
3 AuthorDate: Sat Apr 29 18:39:01 2017 +0000
4 Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
5 CommitDate: Sat Apr 29 18:49:15 2017 +0000
6 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=54d6388c
7
8 sci-chemistry/reduce: Drop old
9
10 Package-Manager: Portage-2.3.5, Repoman-2.3.2
11 Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
12
13 sci-chemistry/reduce/Manifest | 2 -
14 sci-chemistry/reduce/reduce-3.13.080428-r1.ebuild | 53 -----------------------
15 sci-chemistry/reduce/reduce-3.14.080821.ebuild | 50 ---------------------
16 3 files changed, 105 deletions(-)
17
18 diff --git a/sci-chemistry/reduce/Manifest b/sci-chemistry/reduce/Manifest
19 index 802e0d82208..e1b725c10b6 100644
20 --- a/sci-chemistry/reduce/Manifest
21 +++ b/sci-chemistry/reduce/Manifest
22 @@ -1,3 +1 @@
23 -DIST reduce.3.13.080428.src.tgz 4387407 SHA256 6290dad33e395c5a40fe3634db86fb6035ea88ce19c3f25b80fb6378507ac066 SHA512 c976b4cc647b66d5608aa24e6ca159a15a5b2c583d4935b3062d7a9020530b74331aca021ed0fd4f5e552d5c3d408ed6553317529df25a118e2859b89d1f6bf2 WHIRLPOOL d05a8484b9d4a3f39f815880ef27e17a958a60baafd11b2d21d98f29b0b33c70b8b2c071af2e5f17bbf57037411b36e08f43ab3757d26345b034aa12683fa659
24 -DIST reduce.3.14.080821.src.tgz 5199731 SHA256 0c32f3e9f818b976e0996f088639a194cde63f227eff32c35e14526ec05c930a SHA512 9c8d72983b376b1f741afeb08630ad69b6888f526aac0ad72c658e96a6c2d6f17df60dfbf03a35a217be254bbb858f99bd2088aba8877e504a45270371dbad44 WHIRLPOOL aac80449eeceae8afbc5ec8d4ea53152c4f0bff7080fc36d7d74d8e0aaad8e6cb3e5750d67dcab6c7669f58a5f09910a3253db6371828257d03832f1ccbc3418
25 DIST reduce.3.16.111118.src.zip 20342632 SHA256 a9f45dd31eb7022e056cdab1efbbed17fd8be7453396313904c95c839d41dbb3 SHA512 f7b4d8d91f1f57e9e96c91139fa919c570aebd07f3a440faf3df54bf5deb3a05ad998996a24b5fe9aff6280e00329c9914e338cbfe802c047c055f52ce8312a9 WHIRLPOOL 5d5e3c988e39986888eb23907e87ad180a2a441cf236c53406fc43f1cddd25e9e9051ae41d287f35bcf17f3882d720f9cee4c925cbae32139de5848c1fbcccdd
26
27 diff --git a/sci-chemistry/reduce/reduce-3.13.080428-r1.ebuild b/sci-chemistry/reduce/reduce-3.13.080428-r1.ebuild
28 deleted file mode 100644
29 index 2fac50aa8a3..00000000000
30 --- a/sci-chemistry/reduce/reduce-3.13.080428-r1.ebuild
31 +++ /dev/null
32 @@ -1,53 +0,0 @@
33 -# Copyright 1999-2011 Gentoo Foundation
34 -# Distributed under the terms of the GNU General Public License v2
35 -
36 -EAPI=3
37 -
38 -inherit eutils toolchain-funcs
39 -
40 -MY_P="${PN}.${PV}.src"
41 -
42 -DESCRIPTION="Adds hydrogens to a Protein Data Bank (PDB) molecule structure file"
43 -HOMEPAGE="http://kinemage.biochem.duke.edu/software/reduce.php"
44 -SRC_URI="http://kinemage.biochem.duke.edu/downloads/software/reduce31/${MY_P}.tgz"
45 -
46 -LICENSE="richardson"
47 -SLOT="0"
48 -KEYWORDS="amd64 ppc x86 ~amd64-linux ~x86-linux"
49 -IUSE=""
50 -
51 -RDEPEND=""
52 -DEPEND="${RDEPEND}
53 - app-arch/unzip"
54 -
55 -S="${WORKDIR}/${MY_P}"
56 -
57 -src_prepare() {
58 - epatch \
59 - "${FILESDIR}"/${PV}-LDFLAGS.patch \
60 - "${FILESDIR}"/${PV}-CFLAGS.patch
61 -}
62 -
63 -src_compile() {
64 - DICT_DIR="/usr/share/reduce"
65 - DICT_FILE="reduce_het_dict.txt"
66 -
67 - emake \
68 - CC="$(tc-getCC)" \
69 - CXX="$(tc-getCXX)" \
70 - OPT="${CXXFLAGS}" \
71 - DICT_HOME="${EPREFIX}/${DICT_DIR}/${DICT_FILE}" \
72 - || die "make failed"
73 -}
74 -
75 -src_install() {
76 - dobin "${S}"/reduce_src/reduce || die
77 - insinto ${DICT_DIR}
78 - doins "${S}"/${DICT_FILE} "${S}"/reduce_wwPDB_het_dict.txt || die
79 - dodoc README.usingReduce.txt || die
80 -}
81 -
82 -pkg_postinst() {
83 - elog "To use the PDBv3 dictionary instead of PDBv2, set the environment"
84 - elog "variable REDUCE_HET_DICT to ${EPREFIX}/usr/share/reduce/reduce_wwPDB_het_dict.txt"
85 -}
86
87 diff --git a/sci-chemistry/reduce/reduce-3.14.080821.ebuild b/sci-chemistry/reduce/reduce-3.14.080821.ebuild
88 deleted file mode 100644
89 index a8fb9cb6fa9..00000000000
90 --- a/sci-chemistry/reduce/reduce-3.14.080821.ebuild
91 +++ /dev/null
92 @@ -1,50 +0,0 @@
93 -# Copyright 1999-2011 Gentoo Foundation
94 -# Distributed under the terms of the GNU General Public License v2
95 -
96 -EAPI=4
97 -
98 -inherit eutils toolchain-funcs
99 -
100 -MY_P="${PN}.${PV}.src"
101 -
102 -DESCRIPTION="Adds hydrogens to a Protein Data Bank (PDB) molecule structure file"
103 -HOMEPAGE="http://kinemage.biochem.duke.edu/software/reduce.php"
104 -SRC_URI="http://kinemage.biochem.duke.edu/downloads/software/reduce31/${MY_P}.tgz"
105 -
106 -LICENSE="richardson"
107 -SLOT="0"
108 -KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux"
109 -IUSE=""
110 -
111 -RDEPEND=""
112 -DEPEND="${RDEPEND}
113 - app-arch/unzip"
114 -
115 -S="${WORKDIR}/${MY_P}"
116 -
117 -src_prepare() {
118 - epatch \
119 - "${FILESDIR}"/3.13.080428-LDFLAGS.patch \
120 - "${FILESDIR}"/${PV}-CFLAGS.patch
121 -}
122 -
123 -src_compile() {
124 - DICT_DIR="/usr/share/reduce"
125 - DICT_FOLD="reduce_het_dict.txt"
126 - DICT_FNEW="reduce_wwPDB_het_dict.txt"
127 -
128 - emake clean
129 - emake \
130 - CC="$(tc-getCC)" \
131 - CXX="$(tc-getCXX)" \
132 - OPT="${CXXFLAGS}" \
133 - DICT_HOME="${EPREFIX}/${DICT_DIR}/${DICT_FNEW}" \
134 - DICT_OLD="${EPREFIX}/${DICT_DIR}/${DICT_FOLD}"
135 -}
136 -
137 -src_install() {
138 - dobin "${S}"/reduce_src/reduce
139 - insinto ${DICT_DIR}
140 - doins "${S}"/${DICT_FOLD} "${S}"/${DICT_FNEW}
141 - dodoc README.usingReduce.txt
142 -}