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commit: c7a40f0c2955843da5c85d0abbeed58351547ce1 |
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Author: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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AuthorDate: Thu Jul 18 17:12:10 2019 +0000 |
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Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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CommitDate: Thu Jul 18 17:12:10 2019 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=c7a40f0c |
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|
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sci-biology/BRAKER: version bump |
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|
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New HOMEPAGE, SRC_URI, layout of .tar.gz tarball |
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|
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Package-Manager: Portage-2.3.69, Repoman-2.3.16 |
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Signed-off-by: Martin Mokrejs <mmokrejs <AT> fold.natur.cuni.cz> |
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|
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.../BRAKER/{BRAKER-2.1.0.ebuild => BRAKER-2.1.2.ebuild} | 15 +++++++-------- |
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1 file changed, 7 insertions(+), 8 deletions(-) |
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|
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diff --git a/sci-biology/BRAKER/BRAKER-2.1.0.ebuild b/sci-biology/BRAKER/BRAKER-2.1.2.ebuild |
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similarity index 79% |
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rename from sci-biology/BRAKER/BRAKER-2.1.0.ebuild |
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rename to sci-biology/BRAKER/BRAKER-2.1.2.ebuild |
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index 13d63d4b8..908e57e51 100644 |
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--- a/sci-biology/BRAKER/BRAKER-2.1.0.ebuild |
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+++ b/sci-biology/BRAKER/BRAKER-2.1.2.ebuild |
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@@ -1,4 +1,4 @@ |
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-# Copyright 1999-2018 Gentoo Foundation |
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+# Copyright 1999-2019 Gentoo Authors |
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# Distributed under the terms of the GNU General Public License v2 |
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|
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EAPI=5 |
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@@ -8,9 +8,10 @@ inherit perl-module |
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|
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DESCRIPTION="Gene prediction based on RNA-Seq using GeneMark-ET and AUGUSTUS" |
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# http://bioinf.uni-greifswald.de/bioinf/publications/pag2015.pdf |
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-HOMEPAGE="http://bioinf.uni-greifswald.de/bioinf/braker |
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+HOMEPAGE="https://github.com/Gaius-Augustus/BRAKER |
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+ http://bioinf.uni-greifswald.de/bioinf/braker |
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http://bioinf.uni-greifswald.de/augustus/downloads" |
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-SRC_URI="http://bioinf.uni-greifswald.de/augustus/binaries/BRAKER_v"${PV}".tar.gz -> ${P}.tar.gz" |
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+SRC_URI="https://github.com/Gaius-Augustus/BRAKER/archive/v${PV}.tar.gz -> ${P}.tar.gz" |
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# Example data for testing the BRAKER2 pipeline is available at |
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# http://bioinf.uni-greifswald.de/augustus/binaries/BRAKER2examples.tar.gz (1.1 GB). |
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|
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@@ -29,14 +30,12 @@ RDEPEND="${DEPEND} |
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sci-biology/augustus" |
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#>=sci-biology/GeneMark_ET-bin-4.29" |
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|
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-S="${WORKDIR}"/BRAKER_v"${PV}" |
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- |
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src_install(){ |
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perl_set_version |
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- dobin *.pl |
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+ dobin scripts/*.pl |
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insinto ${VENDOR_LIB}/${PN} |
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- doins *.pm |
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- dodoc userguide.pdf |
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+ doins scripts/*.pm |
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+ dodoc docs/userguide.pdf |
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} |
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|
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pkg_postinst(){ |
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