| 1 |
jlec 11/05/03 11:10:40 |
| 2 |
|
| 3 |
Modified: ChangeLog vienna-rna-1.8.5.ebuild |
| 4 |
Log: |
| 5 |
Added python support, #365793 |
| 6 |
|
| 7 |
(Portage version: 2.2.0_alpha30/cvs/Linux x86_64) |
| 8 |
|
| 9 |
Revision Changes Path |
| 10 |
1.37 sci-biology/vienna-rna/ChangeLog |
| 11 |
|
| 12 |
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vienna-rna/ChangeLog?rev=1.37&view=markup |
| 13 |
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vienna-rna/ChangeLog?rev=1.37&content-type=text/plain |
| 14 |
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vienna-rna/ChangeLog?r1=1.36&r2=1.37 |
| 15 |
|
| 16 |
Index: ChangeLog |
| 17 |
=================================================================== |
| 18 |
RCS file: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/ChangeLog,v |
| 19 |
retrieving revision 1.36 |
| 20 |
retrieving revision 1.37 |
| 21 |
diff -u -r1.36 -r1.37 |
| 22 |
--- ChangeLog 20 Mar 2011 20:32:09 -0000 1.36 |
| 23 |
+++ ChangeLog 3 May 2011 11:10:40 -0000 1.37 |
| 24 |
@@ -1,6 +1,10 @@ |
| 25 |
# ChangeLog for sci-biology/vienna-rna |
| 26 |
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 |
| 27 |
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/ChangeLog,v 1.36 2011/03/20 20:32:09 jlec Exp $ |
| 28 |
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/ChangeLog,v 1.37 2011/05/03 11:10:40 jlec Exp $ |
| 29 |
+ |
| 30 |
+ 03 May 2011; Justin Lecher <jlec@g.o> vienna-rna-1.8.5.ebuild, |
| 31 |
+ +files/vienna-rna-1.8.5-setup.py: |
| 32 |
+ Added python support, #365793 |
| 33 |
|
| 34 |
20 Mar 2011; Justin Lecher <jlec@g.o> vienna-rna-1.8.4-r1.ebuild, |
| 35 |
vienna-rna-1.8.4-r2.ebuild, vienna-rna-1.8.5.ebuild: |
| 36 |
|
| 37 |
|
| 38 |
|
| 39 |
1.3 sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild |
| 40 |
|
| 41 |
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild?rev=1.3&view=markup |
| 42 |
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild?rev=1.3&content-type=text/plain |
| 43 |
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild?r1=1.2&r2=1.3 |
| 44 |
|
| 45 |
Index: vienna-rna-1.8.5.ebuild |
| 46 |
=================================================================== |
| 47 |
RCS file: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild,v |
| 48 |
retrieving revision 1.2 |
| 49 |
retrieving revision 1.3 |
| 50 |
diff -u -r1.2 -r1.3 |
| 51 |
--- vienna-rna-1.8.5.ebuild 20 Mar 2011 20:32:09 -0000 1.2 |
| 52 |
+++ vienna-rna-1.8.5.ebuild 3 May 2011 11:10:40 -0000 1.3 |
| 53 |
@@ -1,10 +1,13 @@ |
| 54 |
# Copyright 1999-2011 Gentoo Foundation |
| 55 |
# Distributed under the terms of the GNU General Public License v2 |
| 56 |
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild,v 1.2 2011/03/20 20:32:09 jlec Exp $ |
| 57 |
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild,v 1.3 2011/05/03 11:10:40 jlec Exp $ |
| 58 |
|
| 59 |
-EAPI="2" |
| 60 |
+EAPI="3" |
| 61 |
|
| 62 |
-inherit toolchain-funcs multilib autotools perl-module |
| 63 |
+PYTHON_DEPEND="python? 2" |
| 64 |
+SUPPORT_PYTHON_ABIS="1" |
| 65 |
+ |
| 66 |
+inherit distutils toolchain-funcs multilib autotools perl-module |
| 67 |
|
| 68 |
DESCRIPTION="RNA secondary structure prediction and comparison" |
| 69 |
HOMEPAGE="http://www.tbi.univie.ac.at/~ivo/RNA/" |
| 70 |
@@ -12,7 +15,7 @@ |
| 71 |
|
| 72 |
LICENSE="vienna-rna" |
| 73 |
SLOT="0" |
| 74 |
-IUSE="" |
| 75 |
+IUSE="python" |
| 76 |
KEYWORDS="~amd64 ~ppc ~x86" |
| 77 |
|
| 78 |
DEPEND=" |
| 79 |
@@ -40,6 +43,7 @@ |
| 80 |
|
| 81 |
eautoreconf |
| 82 |
cd RNAforester && eautoreconf |
| 83 |
+ use python && cp "${FILESDIR}"/${P}-setup.py "${S}"/setup.py |
| 84 |
} |
| 85 |
|
| 86 |
src_configure() { |
| 87 |
@@ -57,6 +61,14 @@ |
| 88 |
emake || die |
| 89 |
emake -C Readseq || die "Failed to compile readseq." |
| 90 |
# TODO: Add (optional?) support for the NCBI toolkit. |
| 91 |
+ if use python; then |
| 92 |
+ pushd Perl > /dev/null |
| 93 |
+ mv RNA_wrap.c{,-perl} |
| 94 |
+ swig -python RNA.i |
| 95 |
+ popd > /dev/null |
| 96 |
+ distutils_src_compile |
| 97 |
+ mv Perl/RNA_wrap.c{-perl,} |
| 98 |
+ fi |
| 99 |
} |
| 100 |
|
| 101 |
src_test() { |
| 102 |
@@ -74,4 +86,5 @@ |
| 103 |
|
| 104 |
# remove perlocal.pod to avoid file collisions (see #240358) |
| 105 |
fixlocalpod || die "Failed to remove perlocal.pod" |
| 106 |
+ use python && distutils_src_install |
| 107 |
} |
Archives