[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Aisha Tammy]

commit:     8c5c910f1881b80699c71e5fa46f90c7bb82ede3
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Wed Dec 30 16:34:00 2020 +0000
Commit:     Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Thu Dec 31 17:22:01 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=8c5c910f

dev-python/snakemake: version bump, EAPI bump, bump py targets

Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>

 dev-python/snakemake/snakemake-5.10.0.ebuild | 16 --------
 dev-python/snakemake/snakemake-5.31.1.ebuild | 56 ++++++++++++++++++++++++++++
 2 files changed, 56 insertions(+), 16 deletions(-)

diff --git a/dev-python/snakemake/snakemake-5.10.0.ebuild b/dev-python/snakemake/snakemake-5.10.0.ebuild
deleted file mode 100644
index 03e031837..000000000
--- a/dev-python/snakemake/snakemake-5.10.0.ebuild
+++ /dev/null
@@ -1,16 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_6 )
-
-inherit distutils-r1
-
-DESCRIPTION="Make-like task language"
-HOMEPAGE="https://snakemake.readthedocs.io"
-SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"

diff --git a/dev-python/snakemake/snakemake-5.31.1.ebuild b/dev-python/snakemake/snakemake-5.31.1.ebuild
new file mode 100644
index 000000000..6a358a456
--- /dev/null
+++ b/dev-python/snakemake/snakemake-5.31.1.ebuild
@@ -0,0 +1,56 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{7,8} )
+DISTUTILS_USE_SETUPTOOLS=rdepend
+
+inherit distutils-r1
+
+DESCRIPTION="Make-like task language"
+HOMEPAGE="https://snakemake.readthedocs.io"
+SRC_URI="https://github.com/${PN}/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+# missing test dep google.cloud
+RESTRICT="test"
+
+BDEPEND="test? (
+	dev-python/requests-mock[${PYTHON_USEDEP}]
+	dev-python/google-api-python-client[${PYTHON_USEDEP}]
+	dev-python/jinja[${PYTHON_USEDEP}]
+	dev-python/networkx[${PYTHON_USEDEP}]
+	dev-python/pygments[${PYTHON_USEDEP}]
+	dev-python/pygraphviz[${PYTHON_USEDEP}]
+	dev-python/oauth2client[${PYTHON_USEDEP}]
+	net-libs/google-cloud-cpp
+)"
+
+RDEPEND="
+	dev-python/wrapt[${PYTHON_USEDEP}]
+	dev-python/requests[${PYTHON_USEDEP}]
+	dev-python/ratelimit[${PYTHON_USEDEP}]
+	dev-python/pyyaml[${PYTHON_USEDEP}]
+	dev-python/configargparse[${PYTHON_USEDEP}]
+	dev-python/appdirs[${PYTHON_USEDEP}]
+	dev-python/datrie[${PYTHON_USEDEP}]
+	dev-python/jsonschema[${PYTHON_USEDEP}]
+	dev-python/docutils[${PYTHON_USEDEP}]
+	dev-python/GitPython[${PYTHON_USEDEP}]
+	dev-python/psutil[${PYTHON_USEDEP}]
+	dev-python/nbformat[${PYTHON_USEDEP}]
+	dev-python/toposort[${PYTHON_USEDEP}]
+	sci-mathematics/pulp[${PYTHON_USEDEP}]
+"
+
+distutils_enable_sphinx docs \
+	dev-python/sphinxcontrib-napoleon \
+	dev-python/sphinx-argparse \
+	dev-python/sphinx_rtd_theme \
+	dev-python/docutils \
+	dev-python/recommonmark
+distutils_enable_tests pytest