[gentoo-commits] proj/sci:master commit in: sci-biology/phylobayes/

[Martin Mokrejs]

commit:     7aa8b3f5f5d9e6e0a4d95ebc1a3bfcabfacfa8ba
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Fri Mar  2 19:51:15 2012 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Fri Mar  2 19:51:15 2012 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=7aa8b3f5

sci-biology/phylobayes: new package, no explicit LICENSE stated

---
 sci-biology/phylobayes/ChangeLog              |   10 +++++++
 sci-biology/phylobayes/phylobayes-3.3b.ebuild |   37 +++++++++++++++++++++++++
 2 files changed, 47 insertions(+), 0 deletions(-)

diff --git a/sci-biology/phylobayes/ChangeLog b/sci-biology/phylobayes/ChangeLog
new file mode 100644
index 0000000..ebd3362
--- /dev/null
+++ b/sci-biology/phylobayes/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-biology/phylobayes
+# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*phylobayes-3.3b (02 Mar 2012)
+
+  02 Mar 2012; Martin Mokrejs <mmokrejs@×××××××××××××××.cz>
+  +phylobayes-3.3b.ebuild:
+  initial ebuild
+

diff --git a/sci-biology/phylobayes/phylobayes-3.3b.ebuild b/sci-biology/phylobayes/phylobayes-3.3b.ebuild
new file mode 100644
index 0000000..b456964
--- /dev/null
+++ b/sci-biology/phylobayes/phylobayes-3.3b.ebuild
@@ -0,0 +1,37 @@
+# Copyright 1999-2012 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=3
+
+DESCRIPTION="Phylogenetic Bayesian analysis program"
+HOMEPAGE="http://megasun.bch.umontreal.ca/People/lartillot/www/download.html"
+SRC_URI="http://megasun.bch.umontreal.ca/People/lartillot/www/phylobayes3.3b.tar.gz
+	http://megasun.bch.umontreal.ca/People/lartillot/www/phylobayes3.3.pdf"
+
+LICENSE=""
+SLOT="0"
+#KEYWORDS="~amd64 ~x86"
+KEYWORDS=""
+IUSE="gsl latex"
+
+DEPEND="gsl? ( sci-libs/gsl )"
+RDEPEND="${DEPEND}
+	latex? ( dev-texlive/texlive-latex
+			app-text/dvipsk )"
+
+S="${WORKDIR}"/phylobayes3.3b
+
+src_prepare(){
+	if use gsl; then
+		sed -i 's/#USE_GSL/USE_GSL/' sources/Makefile
+	sed -i 's/CC/CXX/g' sources/Makefile
+	fi
+}
+
+src_install(){
+	dobin exe_lin64/*
+	insinto /usr/share/"${P}"/aux_ps
+	doins aux_ps/header.tex
+	dodoc "${DISTDIR}"/phylobayes3.3.pdf
+}