[gentoo-commits] repo/gentoo:master commit in: sci-libs/avogadrolibs/files/, sci-libs/avogadrolibs/

[David Seifert]

commit:     b9e6d8c7a9ee81fc5e72043d1b3ed399ae8273fd
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Tue Mar  1 12:12:25 2022 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Tue Mar  1 12:12:25 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=b9e6d8c7

sci-libs/avogadrolibs: drop 1.93.0

Closes: https://bugs.gentoo.org/765811
Closes: https://bugs.gentoo.org/810505
Closes: https://bugs.gentoo.org/820767
Closes: https://bugs.gentoo.org/834116
Signed-off-by: David Seifert <soap <AT> gentoo.org>

 sci-libs/avogadrolibs/Manifest                     |  2 -
 sci-libs/avogadrolibs/avogadrolibs-1.93.0.ebuild   | 95 ----------------------
 ...vogadrolibs-1.93.0-fix_AvogadroLibsConfig.patch | 11 ---
 3 files changed, 108 deletions(-)

diff --git a/sci-libs/avogadrolibs/Manifest b/sci-libs/avogadrolibs/Manifest
index 638cbecca2f4..5b03e8ff5f44 100644
--- a/sci-libs/avogadrolibs/Manifest
+++ b/sci-libs/avogadrolibs/Manifest
@@ -1,6 +1,4 @@
-DIST avogadrolibs-1.93.0.tar.gz 2735862 BLAKE2B b5d696f23aeeab27358ee390a30b2cf146e7119185a0d2e8d71b34d2744e534cd8b50b36d12928b5aa723118db470272b6428514593d64770d172c4bde730cf6 SHA512 1af220e5614cbd96656679c2879cb7f7c46acd135b4e6f2e5f8d0ba98601ce004e78f019a0a71c643f005451309bd194eb73eb9f66707685e5855b47e95f7eae
 DIST avogadrolibs-1.95.1.tar.gz 11015910 BLAKE2B 27cb43a22e489c0279e1ed912b1e81f3c850983f367ffb89bef3a63d11204cbf761f2bce6501988ed5ef9b21b44cc5194dad4367da3ae6af65efd0cec5e7d711 SHA512 b4734c732b1686eba74055c4834fef2f9fb66d4a67cd1199c84e81965c3f6e783911e7c7c8d09386c4ff9f1322bab91fe490d3606784ae49acf5531a65a58beb
 DIST avogadrolibs-crystals-1.0.1.tar.gz 151829 BLAKE2B 0a1353392a4c087977452f50ffb7db0b2976a2993651b6f7e0df7a9ce6fa8f7960223cac2916dd9f667d37518b85606d73d05e86f7489193a6a609700fc60223 SHA512 c5d6500d8472807b8d2e62888e4a09279c6aeafec81bc4981edaa74e36724b1e7f0381250c79ad297f9f0331bcb5cd8a45fce3f13ad65b9870e901a6424c0650
 DIST avogadrolibs-molecules-1.0.0.tar.gz 206924 BLAKE2B 70eea3d5eb440ab2c7f29c56111f2b8cf780cc84983aa145bc4f2fe144c981978218333ba3c33cf1f620dd3180cca706dfa4e94ffaee6167f89bd3e372172218 SHA512 06891ea7ad3e65c5b0c0ad73ea01916478fcd13fd9ff0d6905d28159678a50371ba9fa2c1f68ef32604dee0c2165de29bd5d50ffbc345bfe752ef0bcb13126f2
-DIST linux64-genXrdPattern-avogadrolibs-1.93.0 7480152 BLAKE2B dca8285c41aadfaa20c72f337e0f02db8ee07ce30c11ae84bf3aa7bd0b2220273d33f484d63f761d41a8946c6a0b77a0fb27906c480bcae01ae49b1531ae5cbb SHA512 538bde12e1e52600a21640d5907f43fcc853c6f3c111880f39eb238093e3d1358ccdfa1f45e944ec8b8e5ee3c2dff269cefe5334db5d73300e6ca327c95520b8
 DIST linux64-genXrdPattern-avogadrolibs-1.95.1 7480152 BLAKE2B dca8285c41aadfaa20c72f337e0f02db8ee07ce30c11ae84bf3aa7bd0b2220273d33f484d63f761d41a8946c6a0b77a0fb27906c480bcae01ae49b1531ae5cbb SHA512 538bde12e1e52600a21640d5907f43fcc853c6f3c111880f39eb238093e3d1358ccdfa1f45e944ec8b8e5ee3c2dff269cefe5334db5d73300e6ca327c95520b8

diff --git a/sci-libs/avogadrolibs/avogadrolibs-1.93.0.ebuild b/sci-libs/avogadrolibs/avogadrolibs-1.93.0.ebuild
deleted file mode 100644
index 4db9d9a0c2b9..000000000000
--- a/sci-libs/avogadrolibs/avogadrolibs-1.93.0.ebuild
+++ /dev/null
@@ -1,95 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-inherit cmake-utils flag-o-matic
-
-DESCRIPTION="Advanced molecule editor and visualizer 2 - libraries"
-HOMEPAGE="https://www.openchemistry.org/ https://github.com/OpenChemistry/avogadrolibs"
-SRC_URI="
-	https://github.com/OpenChemistry/${PN}/archive/${PV}.tar.gz -> ${P}.tar.gz
-	vtk? ( https://github.com/psavery/genXrdPattern/releases/download/1.0-static/linux64-genXrdPattern -> linux64-genXrdPattern-${P} )
-"
-
-SLOT="0"
-LICENSE="BSD GPL-2+"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-
-# static-plugins needs to be enabled until upstream fixes
-# https://github.com/OpenChemistry/avogadrolibs/issues/436
-#IUSE="archive doc hdf5 qt5 static-plugins test vtk"
-IUSE="archive doc hdf5 qt5 test vtk"
-RESTRICT="!test? ( test )"
-
-REQUIRED_USE="vtk? ( qt5 )"
-
-# TODO: Not yet packaged:
-# sci-libs/libmsym (https://github.com/mcodev31/libmsym)
-# sci-libs/spglib (https://atztogo.github.io/spglib/)
-RDEPEND="
-	dev-libs/jsoncpp:=
-	>=sci-chemistry/molequeue-0.7
-	sci-libs/spglib
-	archive? ( app-arch/libarchive )
-	hdf5? ( sci-libs/hdf5:= )
-	qt5? (
-		dev-qt/qtconcurrent:5
-		dev-qt/qtcore:5
-		dev-qt/qtgui:5
-		dev-qt/qtnetwork:5
-		dev-qt/qtwidgets:5
-		media-libs/glew:0=
-		virtual/opengl
-	)
-	vtk? ( sci-libs/vtk[qt5,views] )
-"
-DEPEND="${RDEPEND}
-	dev-cpp/eigen:3
-	qt5? ( dev-qt/linguist-tools:5 )
-	test? ( dev-cpp/gtest )"
-
-PATCHES=(
-	# https://github.com/OpenChemistry/avogadrolibs/issues/449
-	"${FILESDIR}"/${PN}-1.93.0-fix_AvogadroLibsConfig.patch
-	"${FILESDIR}/"${PN}-1.91.0_pre20180406-bundled-genxrdpattern.patch
-)
-
-src_unpack() {
-	default
-	if use vtk; then
-		cp "${DISTDIR}"/linux64-genXrdPattern-${P} "${WORKDIR}/genXrdPattern" || die
-	fi
-}
-
-src_configure() {
-	# Seems to be what upstream are using too. Apply the old hdf5lib workaround.
-	# https://github.com/OpenChemistry/avogadrolibs/commit/32e3dd8ce9f48f74e3960dc9afcc614496d87c7f
-	# bug #810505
-	append-cppflags -DH5_USE_110_API
-
-	# -DBUILD_STATIC_PLUGINS=$(usex static-plugins)
-	local mycmakeargs=(
-		-DCMAKE_INSTALL_DOCDIR="${EPREFIX}/usr/share/doc/${PF}"
-		-DUSE_PROTOCALL=OFF
-		-DBUILD_GPL_PLUGINS=ON
-		-DUSE_MOLEQUEUE=ON
-		-DUSE_MMTF=OFF
-		-DUSE_LIBMSYM=OFF
-		-DUSE_SPGLIB=OFF
-		-DUSE_PYTHON=OFF
-		-DUSE_LIBARCHIVE=$(usex archive)
-		-DBUILD_DOCUMENTATION=$(usex doc)
-		-DUSE_HDF5=$(usex hdf5)
-		-DENABLE_TRANSLATIONS=$(usex qt5)
-		-DUSE_OPENGL=$(usex qt5)
-		-DUSE_QT=$(usex qt5)
-		-DBUILD_STATIC_PLUGINS=ON
-		-DENABLE_TESTING=$(usex test)
-		-DUSE_VTK=$(usex vtk)
-	)
-	use vtk && mycmakeargs+=(
-		-DBUNDLED_GENXRDPATTERN="${WORKDIR}/genXrdPattern"
-	)
-
-	cmake-utils_src_configure
-}

diff --git a/sci-libs/avogadrolibs/files/avogadrolibs-1.93.0-fix_AvogadroLibsConfig.patch b/sci-libs/avogadrolibs/files/avogadrolibs-1.93.0-fix_AvogadroLibsConfig.patch
deleted file mode 100644
index 5eb316af9414..000000000000
--- a/sci-libs/avogadrolibs/files/avogadrolibs-1.93.0-fix_AvogadroLibsConfig.patch
+++ /dev/null
@@ -1,11 +0,0 @@
---- a/cmake/AvogadroLibsConfig.cmake.orig.in	2016-12-01 22:17:48.000000000 +0100
-+++ b/cmake/AvogadroLibsConfig.cmake.in	2017-03-11 20:39:36.462581381 +0100
-@@ -10,7 +10,7 @@
- 
- set(AvogadroLibs_INSTALL_PREFIX  "@CMAKE_INSTALL_PREFIX@")
- set(AvogadroLibs_INCLUDE_DIRS    "${AvogadroLibs_INSTALL_PREFIX}/@INSTALL_INCLUDE_DIR@")
--set(AvogadroLibs_LIBRARY_DIR     "${AvogadroLibs_INSTALL_PREFIX}/@INSTALL_LIBRARY_DIR@@LIB_SUFFIX@")
-+set(AvogadroLibs_LIBRARY_DIR     "${AvogadroLibs_INSTALL_PREFIX}/@INSTALL_LIBRARY_DIR@")
- set(AvogadroLibs_RUNTIME_DIR     "${AvogadroLibs_INSTALL_PREFIX}/@INSTALL_RUNTIME_DIR@")
- set(AvogadroLibs_CMAKE_DIR       "${AvogadroLibs_LIBRARY_DIR}/cmake/avogadrolibs")
-