Gentoo Archives: gentoo-commits

From: Andreas Sturmlechner <asturm@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/mustang/
Date: Thu, 21 May 2020 08:14:19
Message-Id: 1590048795.32291a189d949496247c3cc73bca19b59ef69c0f.asturm@gentoo
1 commit: 32291a189d949496247c3cc73bca19b59ef69c0f
2 Author: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
3 AuthorDate: Thu May 21 08:10:18 2020 +0000
4 Commit: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
5 CommitDate: Thu May 21 08:13:15 2020 +0000
6 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=32291a18
7
8 sci-chemistry/mustang: Drop 3.2.1
9
10 Package-Manager: Portage-2.3.99, Repoman-2.3.22
11 Signed-off-by: Andreas Sturmlechner <asturm <AT> gentoo.org>
12
13 sci-chemistry/mustang/Manifest | 1 -
14 sci-chemistry/mustang/mustang-3.2.1.ebuild | 48 ------------------------------
15 2 files changed, 49 deletions(-)
16
17 diff --git a/sci-chemistry/mustang/Manifest b/sci-chemistry/mustang/Manifest
18 index 1bb10e0d7b7..e053c2f20e0 100644
19 --- a/sci-chemistry/mustang/Manifest
20 +++ b/sci-chemistry/mustang/Manifest
21 @@ -1,2 +1 @@
22 -DIST mustang_v3.2.1.tgz 161216 BLAKE2B 8e96ecc7a77eeb9729f4c7f050f8c088e7b57c8d6c9bf436efc173449157db40fe0ef826249fc006edd5b3d87fa8a7b49708f14e8768aba1f6e7ac243f3e0bbf SHA512 aee37bb77edbdc601cdc735db8602d0a3804065200df1b36b6956e74dfd5f85b554a655be1bfbe673aada1abd5e1aee1c0f59fb2ff0380bfcb725e38439d41ff
23 DIST mustang_v3.2.2.tgz 141940 BLAKE2B b90b42df782bd1dbdb387d0d0ab42430c5212b439da84f56a33ca2c746c8937ae330dfb8d634e7d1c5ffd0f6959cd9e4be0efe8f569c452930a3481894c68ec5 SHA512 cb862f860f3cdb3349743c6005a29acc14cde5269df9d61f1100ffdc9a22c1d8e3dd46771371557b823724e79783f8fcb7356c63c6f0c0a09aac09bee407a26d
24
25 diff --git a/sci-chemistry/mustang/mustang-3.2.1.ebuild b/sci-chemistry/mustang/mustang-3.2.1.ebuild
26 deleted file mode 100644
27 index 47e67a964a4..00000000000
28 --- a/sci-chemistry/mustang/mustang-3.2.1.ebuild
29 +++ /dev/null
30 @@ -1,48 +0,0 @@
31 -# Copyright 1999-2012 Gentoo Foundation
32 -# Distributed under the terms of the GNU General Public License v2
33 -
34 -EAPI=4
35 -
36 -inherit eutils toolchain-funcs
37 -
38 -MY_PN="MUSTANG"
39 -SRC_P="${PN}_v${PV}"
40 -MY_P="${MY_PN}_v${PV}"
41 -
42 -DESCRIPTION="MUltiple STructural AligNment AlGorithm"
43 -HOMEPAGE="http://www.csse.monash.edu.au/~karun/Site/mustang.html"
44 -SRC_URI="http://www.csse.unimelb.edu.au/~arun/${PN}/${SRC_P}.tgz"
45 -
46 -LICENSE="BSD"
47 -SLOT="0"
48 -KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
49 -IUSE=""
50 -
51 -S="${WORKDIR}/${MY_P}"
52 -
53 -src_prepare() {
54 - epatch "${FILESDIR}"/${P}-gcc-4.7.patch
55 -}
56 -
57 -src_compile() {
58 - emake \
59 - CPP=$(tc-getCXX) \
60 - CPPFLAGS="${CXXFLAGS}" \
61 - LDFLAGS="${LDFLAGS}"
62 -}
63 -
64 -src_test() {
65 - ./bin/${P} -f ./data/test/test_zf-CCHH || die
66 -}
67 -
68 -src_install() {
69 - newbin bin/${P} mustang
70 - doman man/${PN}.1
71 - dodoc README
72 -}
73 -
74 -pkg_postinst() {
75 - elog "If you use this program for an academic paper, please cite:"
76 - elog "Arun S. Konagurthu, James C. Whisstock, Peter J. Stuckey, and Arthur M. Lesk"
77 - elog "Proteins: Structure, Function, and Bioinformatics. 64(3):559-574, Aug. 2006"
78 -}