From: | "Justin Lecher (jlec)" <jlec@g.o> |
---|---|
To: | gentoo-commits@l.g.o |
Subject: | [gentoo-commits] gentoo-x86 commit in sci-chemistry/numbat: metadata.xml ChangeLog numbat-0.999.ebuild Manifest |
Date: | Tue, 21 May 2013 10:55:43 |
Message-Id: | 20130521105538.3EF502171D@flycatcher.gentoo.org |
1 | jlec 13/05/21 10:55:38 |
2 | |
3 | Added: metadata.xml ChangeLog numbat-0.999.ebuild Manifest |
4 | Log: |
5 | sci-chemistry/numbat: New addition |
6 | |
7 | (Portage version: 2.2.0_alpha176/cvs/Linux x86_64, signed Manifest commit with key 8009D6F070EB7916) |
8 | |
9 | Revision Changes Path |
10 | 1.1 sci-chemistry/numbat/metadata.xml |
11 | |
12 | file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/numbat/metadata.xml?rev=1.1&view=markup |
13 | plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/numbat/metadata.xml?rev=1.1&content-type=text/plain |
14 | |
15 | Index: metadata.xml |
16 | =================================================================== |
17 | <?xml version="1.0" encoding="UTF-8"?> |
18 | <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
19 | <pkgmetadata> |
20 | <herd>sci-chemistry</herd> |
21 | <maintainer> |
22 | <email>jlec@g.o</email> |
23 | </maintainer> |
24 | <longdescription> |
25 | Numbat is a user friendly software that fits dX-tensor to a set of PCS |
26 | measurements and a structure from a PDB file. It has also been designed to |
27 | assist in the semi automatic process of PCS assignment. A detailed description |
28 | of the software can be found in this publication: |
29 | |
30 | Christophe Schmitz, Mitchell J. Stanton-Cook, Xun-Cheng Su, Gottfried Otting, |
31 | and Thomas Huber (2008). Numbat: an interactive software tool for fitting |
32 | Δχ-tensors to molecular coordinates using pseudocontact shifts. Journal of |
33 | Biomolecular NMR. 41:179-189. |
34 | </longdescription> |
35 | </pkgmetadata> |
36 | |
37 | |
38 | |
39 | 1.1 sci-chemistry/numbat/ChangeLog |
40 | |
41 | file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/numbat/ChangeLog?rev=1.1&view=markup |
42 | plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/numbat/ChangeLog?rev=1.1&content-type=text/plain |
43 | |
44 | Index: ChangeLog |
45 | =================================================================== |
46 | # ChangeLog for sci-chemistry/numbat |
47 | # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 |
48 | # $Header: /var/cvsroot/gentoo-x86/sci-chemistry/numbat/ChangeLog,v 1.1 2013/05/21 10:55:38 jlec Exp $ |
49 | |
50 | *numbat-0.999 (21 May 2013) |
51 | |
52 | 21 May 2013; Justin Lecher <jlec@g.o> +numbat-0.999.ebuild, |
53 | +metadata.xml: |
54 | New addition |
55 | |
56 | |
57 | |
58 | |
59 | 1.1 sci-chemistry/numbat/numbat-0.999.ebuild |
60 | |
61 | file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/numbat/numbat-0.999.ebuild?rev=1.1&view=markup |
62 | plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/numbat/numbat-0.999.ebuild?rev=1.1&content-type=text/plain |
63 | |
64 | Index: numbat-0.999.ebuild |
65 | =================================================================== |
66 | # Copyright 1999-2013 Gentoo Foundation |
67 | # Distributed under the terms of the GNU General Public License v2 |
68 | # $Header: /var/cvsroot/gentoo-x86/sci-chemistry/numbat/numbat-0.999.ebuild,v 1.1 2013/05/21 10:55:38 jlec Exp $ |
69 | |
70 | EAPI=5 |
71 | |
72 | AUTOTOOLS_AUTORECONF=true |
73 | |
74 | inherit autotools-utils |
75 | |
76 | MY_PN="Numbat" |
77 | MY_P="${MY_PN}-${PV}" |
78 | |
79 | DESCRIPTION="new user-friendly method built for automatic dX-tensor determination" |
80 | HOMEPAGE="http://www.nmr.chem.uu.nl/~christophe/numbat.html" |
81 | SRC_URI="${MY_P}.tar.gz" |
82 | |
83 | SLOT="0" |
84 | LICENSE="GPL-3" |
85 | KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" |
86 | IUSE="" |
87 | |
88 | CDEPEND=" |
89 | gnome-base/libglade:2.0 |
90 | sci-libs/gsl |
91 | x11-libs/gtk+:2" |
92 | DEPEND="${CDEPEND} |
93 | virtual/pkgconfig" |
94 | RDEPEND="${CDEPEND} |
95 | sci-chemistry/molmol |
96 | sci-chemistry/pymol" |
97 | |
98 | RESTRICT="fetch" |
99 | |
100 | S="${WORKDIR}"/${MY_P} |
101 | |
102 | pkg_nofetch() { |
103 | elog "Please email the author (numbat.pcs@×××××.com)" |
104 | elog "in order to obtain a copy of the source code" |
105 | elog "and place it in ${DISTDIR}" |
106 | } |
107 | |
108 | src_prepare() { |
109 | sed \ |
110 | -e '/COPYING/d' \ |
111 | -e "s:doc/numbat:share/doc/${PF}:g" \ |
112 | -i Makefile.am src/common.h || die |
113 | autotools-utils_src_prepare |
114 | } |
115 | |
116 | src_install() { |
117 | docompress -x /usr/share/doc/${PF} |
118 | autotools-utils_src_install |
119 | } |
120 | |
121 | |
122 | |
123 | 1.1 sci-chemistry/numbat/Manifest |
124 | |
125 | file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/numbat/Manifest?rev=1.1&view=markup |
126 | plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/numbat/Manifest?rev=1.1&content-type=text/plain |
127 | |
128 | Index: Manifest |
129 | =================================================================== |
130 | DIST Numbat-0.999.tar.gz 739894 SHA256 f58cca5a38abe599a1a27903aeeeafc8ad1d65ab30109e535faabfb85a525b99 SHA512 a2cc784defbc4be8cb04f84d53a8ef8f2fe49b0c778f5acb91c43b3ee8015030632c7c7fed761573f8174ea43d45c86fcdbe16f7dc8f65858e6d50a79e945b7b WHIRLPOOL 10a44ec06a0956966e796235390cf62af752c7a3207b12e8664aa55faba6f8594d706f695f0141bbbd842ec4cfb561ef44ff4327840ae61866c8c9a2dcadb217 |
131 | EBUILD numbat-0.999.ebuild 1080 SHA256 111df77eddcf14dfa7b023fb8a8e9fd14971eee50ef0a7655c4a0a32852cd9a2 SHA512 cd80384da2b0ec5ee549a035f8e7cce76e5b1d34e11c43dae11d7bd50e46f1b2f74dc1966fe46fdc1a86e6fc2448f51b256a80f4173974a6701f0c9d39bb3dbb WHIRLPOOL 00c320dfd765b3db585d58d31d1f3f9f4840fbc527f619880c22e5f7d4223b0b5d18b7472c4c0868ec01a5e29be8aac731377aece6a796a9875e3f0bd37dcf9f |
132 | MISC ChangeLog 252 SHA256 e5813ac9d1300c76a91612509acea9abd4e0a8534485e1c25ba380b67e78db6d SHA512 ba1cc2d69dbb1285ee33a21fba50773a94bb171fb28f095914113b23b224486ad213fa148ce853717ab0fac85c34569b7fe5a6b776e8ed547c2fd9b820f12a1b WHIRLPOOL b8145a6536f0bb847c28924da0c3619ca0085d5d3894461ee5820e8081657b95367d5e01833630e8f01e690a6e70a13af6f57b3bf1a7e6c426f880291847ce6c |
133 | MISC metadata.xml 815 SHA256 d206519f00fba341f9532a4d4718574b324095004b39f8d4195914d61cd150d9 SHA512 4d1e29bee0ab5335e1b6684f613d34e29f5b336bb8b64701661c39b80a3029b445d561115f520b3416224ccb02f8e799d2e35e03990a2f1184743448d875c6d6 WHIRLPOOL 485d3f6f307bbebb38bd50ba868edd7149e2ca6b4757aa3b84f79c4b7455d8469ddb643986ecaed93bc83846cae1551f2035fe67fcbbefc24ae082113896b478 |