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jlec 15/03/29 13:10:18 |
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|
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Modified: ChangeLog |
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Added: t-coffee-11.00.ebuild |
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Removed: t-coffee-8.93.ebuild |
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Log: |
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Version Bump; drop old |
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|
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(Portage version: 2.2.18/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!) |
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|
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Revision Changes Path |
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1.54 sci-biology/t-coffee/ChangeLog |
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|
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file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/t-coffee/ChangeLog?rev=1.54&view=markup |
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plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/t-coffee/ChangeLog?rev=1.54&content-type=text/plain |
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diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/t-coffee/ChangeLog?r1=1.53&r2=1.54 |
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Index: ChangeLog |
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=================================================================== |
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RCS file: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/ChangeLog,v |
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retrieving revision 1.53 |
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retrieving revision 1.54 |
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diff -u -r1.53 -r1.54 |
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--- ChangeLog 9 Feb 2015 12:50:38 -0000 1.53 |
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+++ ChangeLog 29 Mar 2015 13:10:18 -0000 1.54 |
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@@ -1,6 +1,12 @@ |
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# ChangeLog for sci-biology/t-coffee |
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# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 |
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-# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/ChangeLog,v 1.53 2015/02/09 12:50:38 blueness Exp $ |
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+# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/ChangeLog,v 1.54 2015/03/29 13:10:18 jlec Exp $ |
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+ |
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+*t-coffee-11.00 (29 Mar 2015) |
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+ |
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+ 29 Mar 2015; Justin Lecher <jlec@g.o> +t-coffee-11.00.ebuild, |
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+ -t-coffee-8.93.ebuild: |
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+ Version Bump; drop old |
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|
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09 Feb 2015; Anthony G. Basile <blueness@g.o> t-coffee-8.69.ebuild, |
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t-coffee-8.93.ebuild, t-coffee-9.03.1318-r1.ebuild: |
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1.1 sci-biology/t-coffee/t-coffee-11.00.ebuild |
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file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/t-coffee/t-coffee-11.00.ebuild?rev=1.1&view=markup |
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plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/t-coffee/t-coffee-11.00.ebuild?rev=1.1&content-type=text/plain |
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|
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Index: t-coffee-11.00.ebuild |
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=================================================================== |
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# Copyright 1999-2015 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-11.00.ebuild,v 1.1 2015/03/29 13:10:18 jlec Exp $ |
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EAPI=5 |
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|
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inherit eutils flag-o-matic toolchain-funcs |
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|
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MY_HASH="8cbe486" |
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MY_PV="${PV}.${MY_HASH}" |
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MY_P="T-COFFEE_distribution_Version_${MY_PV}" |
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|
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DESCRIPTION="A multiple sequence alignment package" |
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HOMEPAGE="http://www.tcoffee.org/Projects_home_page/t_coffee_home_page.html" |
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SRC_URI="http://www.tcoffee.org/Packages/Stable/Version_${MY_PV}/${MY_P}.tar.gz" |
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|
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LICENSE="GPL-2" |
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SLOT="0" |
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KEYWORDS="~amd64 ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux" |
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IUSE="examples" |
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|
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RDEPEND=" |
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sci-biology/clustalw |
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sci-chemistry/tm-align" |
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DEPEND="" |
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|
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S="${WORKDIR}/${MY_P}" |
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|
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src_prepare() { |
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sed \ |
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-e '/@/s:.*;:\t:g' \ |
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-e '/Linking/s:$(CC):$(CC) $(CFLAGS) $(LDFLAGS):g' \ |
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-i t_coffee_source/makefile || die |
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} |
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|
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src_compile() { |
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[[ $(gcc-version) == "3.4" ]] || \ |
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[[ $(gcc-version) == "4.1" ]] && \ |
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append-flags -fno-unit-at-a-time |
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emake \ |
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V=1 \ |
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CC="$(tc-getCXX)" \ |
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CFLAGS="${CXXFLAGS} -Wno-write-strings -Wno-unused-result" \ |
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-C t_coffee_source t_coffee |
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} |
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|
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src_install() { |
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dobin t_coffee_source/t_coffee |
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|
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if use examples; then |
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insinto /usr/share/${PN} |
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doins -r example |
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fi |
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} |
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