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commit: fbb39ffdcd8232fb3e7346355f4d7b50eb429dc1 |
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Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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AuthorDate: Thu Apr 30 21:16:20 2015 +0000 |
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Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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CommitDate: Thu Apr 30 21:16:20 2015 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=fbb39ffd |
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|
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sci-biology/MaSuRCA: version bump |
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|
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Package-Manager: portage-2.2.18 |
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|
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sci-biology/MaSuRCA/ChangeLog | 8 ++++++- |
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...{MaSuRCA-2.1.0.ebuild => MaSuRCA-2.3.2b.ebuild} | 26 +++++++++------------- |
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2 files changed, 17 insertions(+), 17 deletions(-) |
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|
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diff --git a/sci-biology/MaSuRCA/ChangeLog b/sci-biology/MaSuRCA/ChangeLog |
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index e9d6a2c..4014eea 100644 |
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--- a/sci-biology/MaSuRCA/ChangeLog |
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+++ b/sci-biology/MaSuRCA/ChangeLog |
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@@ -1,7 +1,13 @@ |
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# ChangeLog for sci-biology/MaSuRCA |
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-# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 |
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+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 |
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# $Header: $ |
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|
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+*MaSuRCA-2.3.2b (30 Apr 2015) |
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+ |
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+ 30 Apr 2015; Martin Mokrejs <mmokrejs@×××××××××××××××.cz> |
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+ +MaSuRCA-2.3.2b.ebuild, -MaSuRCA-2.1.0.ebuild: |
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+ sci-biology/MaSuRCA: version bump |
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+ |
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16 Sep 2014; Christoph Junghans <ottxor@g.o> MaSuRCA-2.1.0.ebuild: |
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added license |
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|
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|
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diff --git a/sci-biology/MaSuRCA/MaSuRCA-2.1.0.ebuild b/sci-biology/MaSuRCA/MaSuRCA-2.3.2b.ebuild |
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similarity index 67% |
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rename from sci-biology/MaSuRCA/MaSuRCA-2.1.0.ebuild |
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rename to sci-biology/MaSuRCA/MaSuRCA-2.3.2b.ebuild |
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index 04e8172..01eeeeb 100644 |
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--- a/sci-biology/MaSuRCA/MaSuRCA-2.1.0.ebuild |
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+++ b/sci-biology/MaSuRCA/MaSuRCA-2.3.2b.ebuild |
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@@ -1,4 +1,4 @@ |
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-# Copyright 1999-2014 Gentoo Foundation |
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+# Copyright 1999-2015 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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# $Header: $ |
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|
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@@ -16,33 +16,27 @@ IUSE="" |
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|
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DEPEND="dev-lang/perl |
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app-arch/bzip2" |
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-RDEPEND="${DEPEND}" |
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- #sci-biology/quorum" |
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+RDEPEND="${DEPEND} |
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+ >=sci-biology/quorum-0.2.1 |
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+ >=sci-biology/jellyfish-1.1.11" |
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|
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# the ebuild mimics "${S}"/install.sh |
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src_configure(){ |
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- cd jellyfish-1.1.11 || die |
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+ cd jellyfish || die |
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econf |
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|
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- cd ../jellyfish-2.0.0rc1 || die |
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- econf --program-suffix=-2.0 |
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- |
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cd ../CA/kmer || die |
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- sh ./configure.sh |
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econf |
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|
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- cd ../../SuperReads-0.3.2 || die |
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+ cd ../../SuperReads || die |
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econf |
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|
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- cd ../quorum-0.3.2 || die |
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+ cd ../quorum || die |
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econf --enable-relative-paths --with-relative-jf-path |
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} |
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|
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src_compile(){ |
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- cd jellyfish-1.1.11 || die |
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- emake |
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- |
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- cd ../jellyfish-2.0.0rc1 || die |
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+ cd jellyfish || die |
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emake |
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|
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cd ../CA/kmer || die |
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@@ -51,10 +45,10 @@ src_compile(){ |
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cd ../../CA/src || die |
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emake |
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|
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- cd ../SuperReads-0.3.2 || die |
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+ cd ../SuperReads || die |
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emake |
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|
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- cd ../quorum-0.3.2 || die |
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+ cd ../quorum || die |
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emake |
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} |