From: | "Olivier Fisette (ribosome)" <ribosome@g.o> |
---|---|
To: | gentoo-commits@l.g.o |
Subject: | [gentoo-commits] gentoo-x86 commit in sci-biology/rebase: ChangeLog rebase-808.ebuild |
Date: | Wed, 27 Aug 2008 14:58:54 |
Message-Id: | E1KYMTz-0006hG-9f@stork.gentoo.org |
1 | ribosome 08/08/27 14:58:51 |
2 | |
3 | Modified: ChangeLog |
4 | Added: rebase-808.ebuild |
5 | Log: |
6 | New upstream version. |
7 | (Portage version: 2.1.4.4) |
8 | |
9 | Revision Changes Path |
10 | 1.87 sci-biology/rebase/ChangeLog |
11 | |
12 | file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/rebase/ChangeLog?rev=1.87&view=markup |
13 | plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/rebase/ChangeLog?rev=1.87&content-type=text/plain |
14 | diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/rebase/ChangeLog?r1=1.86&r2=1.87 |
15 | |
16 | Index: ChangeLog |
17 | =================================================================== |
18 | RCS file: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v |
19 | retrieving revision 1.86 |
20 | retrieving revision 1.87 |
21 | diff -u -r1.86 -r1.87 |
22 | --- ChangeLog 20 Aug 2007 17:25:03 -0000 1.86 |
23 | +++ ChangeLog 27 Aug 2008 14:58:50 -0000 1.87 |
24 | @@ -1,6 +1,11 @@ |
25 | # ChangeLog for sci-biology/rebase |
26 | -# Copyright 2000-2007 Gentoo Foundation; Distributed under the GPL v2 |
27 | -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.86 2007/08/20 17:25:03 ribosome Exp $ |
28 | +# Copyright 2000-2008 Gentoo Foundation; Distributed under the GPL v2 |
29 | +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.87 2008/08/27 14:58:50 ribosome Exp $ |
30 | + |
31 | +*rebase-808 (27 Aug 2008) |
32 | + |
33 | + 27 Aug 2008; Olivier Fisette <ribosome@g.o> +rebase-808.ebuild: |
34 | + New upstream version. |
35 | |
36 | *rebase-708 (20 Aug 2007) |
37 | |
38 | |
39 | |
40 | |
41 | 1.1 sci-biology/rebase/rebase-808.ebuild |
42 | |
43 | file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/rebase/rebase-808.ebuild?rev=1.1&view=markup |
44 | plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/rebase/rebase-808.ebuild?rev=1.1&content-type=text/plain |
45 | |
46 | Index: rebase-808.ebuild |
47 | =================================================================== |
48 | # Copyright 1999-2008 Gentoo Foundation |
49 | # Distributed under the terms of the GNU General Public License v2 |
50 | # $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-808.ebuild,v 1.1 2008/08/27 14:58:50 ribosome Exp $ |
51 | |
52 | DESCRIPTION="A restriction enzyme database" |
53 | LICENSE="public-domain" |
54 | HOMEPAGE="http://rebase.neb.com" |
55 | SRC_URI="mirror://gentoo/${P}.tar.bz2" |
56 | |
57 | SLOT="0" |
58 | # Minimal build keeps only the indexed files (if applicable) and the |
59 | # documentation. The non-indexed database is not installed. |
60 | IUSE="emboss minimal" |
61 | KEYWORDS="~amd64 ~ppc ~ppc64 ~sparc ~x86" |
62 | |
63 | DEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )" |
64 | |
65 | src_compile() { |
66 | if use emboss; then |
67 | echo; einfo "Indexing Rebase for usage with EMBOSS." |
68 | mkdir REBASE |
69 | EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${PV} \ |
70 | -protofile proto.${PV} -equivalences \ |
71 | || die "Indexing Rebase failed." |
72 | echo |
73 | fi |
74 | } |
75 | |
76 | src_install() { |
77 | if ! use minimal; then |
78 | insinto /usr/share/${PN} |
79 | doins withrefm.${PV} proto.${PV} || die \ |
80 | "Failed to install raw database." |
81 | fi |
82 | newdoc REBASE.DOC README || die "Failed to install documentation." |
83 | if use emboss; then |
84 | insinto /usr/share/EMBOSS/data/REBASE |
85 | doins REBASE/embossre.{enz,ref,sup} || die \ |
86 | "Failed to install EMBOSS data files." |
87 | insinto /usr/share/EMBOSS/data |
88 | doins REBASE/embossre.equ \ |
89 | || die "Failed to install enzyme prototypes file." |
90 | fi |
91 | } |