[gentoo-commits] proj/sci:master commit in: sci-biology/conifer/

[Justin Lecher]

commit:     8812b7d491fd83c984db309dfcfa09e7f9506ebc
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sun Mar 16 12:59:28 2014 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Mar 22 09:44:40 2014 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=8812b7d4

sci-biology/conifer: new package

Package-Manager: portage-2.2.7

---
 sci-biology/conifer/ChangeLog            |  9 +++++++++
 sci-biology/conifer/conifer-0.2.2.ebuild | 25 +++++++++++++++++++++++++
 sci-biology/conifer/metadata.xml         |  9 +++++++++
 3 files changed, 43 insertions(+)

diff --git a/sci-biology/conifer/ChangeLog b/sci-biology/conifer/ChangeLog
new file mode 100644
index 0000000..bfb4794
--- /dev/null
+++ b/sci-biology/conifer/ChangeLog
@@ -0,0 +1,9 @@
+# ChangeLog for sci-biology/conifer
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*conifer-0.2.2 (16 Mar 2014)
+
+  16 Mar 2014; Martin Mokrejs <mmokrejs@×××××××××××××××.cz>
+  +conifer-0.2.2.ebuild, +metadata.xml:
+  sci-biology/conifer: new package

diff --git a/sci-biology/conifer/conifer-0.2.2.ebuild b/sci-biology/conifer/conifer-0.2.2.ebuild
new file mode 100644
index 0000000..8b012df
--- /dev/null
+++ b/sci-biology/conifer/conifer-0.2.2.ebuild
@@ -0,0 +1,25 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+PYTHON_COMPAT=( python{2_6,2_7} )
+
+DESCRIPTION="Copy Number Inference/Variants (CNV) from exome reads"
+HOMEPAGE="http://conifer.sf.net"
+SRC_URI="http://downloads.sourceforge.net/project/conifer/CoNIFER%200.2.2/conifer_v0.2.2.tar.gz"
+
+LICENSE="GPL-3+"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE=""
+
+DEPEND=""
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}"/"${PN}"_v"${PV}"
+
+src_install(){
+	dobin *.py
+}

diff --git a/sci-biology/conifer/metadata.xml b/sci-biology/conifer/metadata.xml
new file mode 100644
index 0000000..2bc8930
--- /dev/null
+++ b/sci-biology/conifer/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <herd>sci-biology</herd>
+  <maintainer>
+    <email>mmokrejs@×××××××××××××××.cz</email>
+    <name>Martin Mokrejs</name>
+  </maintainer>
+</pkgmetadata>