[gentoo-commits] proj/sci:master commit in: sci-biology/trim_galore/

[Martin Mokrejs]

commit:     0332b789cf3cc7708353f519155cc504b9a3ce4c
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Tue Feb 24 23:03:47 2015 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Tue Feb 24 23:03:47 2015 +0000
URL:        http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=0332b789

version bump; installs the simple perl script and PDF doc files

Package-Manager: portage-2.2.15

---
 sci-biology/trim_galore/ChangeLog                        |  8 +++++++-
 ...trim_galore-0.3.3.ebuild => trim_galore-0.3.7.ebuild} | 16 ++++++++++++----
 2 files changed, 19 insertions(+), 5 deletions(-)

diff --git a/sci-biology/trim_galore/ChangeLog b/sci-biology/trim_galore/ChangeLog
index 3dba931..e87a544 100644
--- a/sci-biology/trim_galore/ChangeLog
+++ b/sci-biology/trim_galore/ChangeLog
@@ -1,7 +1,13 @@
 # ChangeLog for sci-biology/trim_galore
-# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*trim_galore-0.3.7 (24 Feb 2015)
+
+  24 Feb 2015; Martin Mokrejs <mmokrejs@×××××××××××××××.cz>
+  +trim_galore-0.3.7.ebuild, -trim_galore-0.3.3.ebuild:
+  version bump; installs the simple perl script and PDF doc files
+
 *trim_galore-0.3.3 (23 Mar 2014)
 
   23 Mar 2014; Martin Mokrejs <mmokrejs@×××××××××××××××.cz> +metadata.xml,

diff --git a/sci-biology/trim_galore/trim_galore-0.3.3.ebuild b/sci-biology/trim_galore/trim_galore-0.3.7.ebuild
similarity index 56%
rename from sci-biology/trim_galore/trim_galore-0.3.3.ebuild
rename to sci-biology/trim_galore/trim_galore-0.3.7.ebuild
index 258ee38..4a0c4bd 100644
--- a/sci-biology/trim_galore/trim_galore-0.3.3.ebuild
+++ b/sci-biology/trim_galore/trim_galore-0.3.7.ebuild
@@ -1,12 +1,12 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 
 EAPI=5
 
-DESCRIPTION="Wrapper around Cutadapt and FastQC to consistently apply quality and adapter trimming"
-HOMEPAGE="http://www.bioinformatics.babraham.ac.uk/projects/trim_galore/"
-SRC_URI="http://www.bioinformatics.babraham.ac.uk/projects/trim_galore/trim_galore_v0.3.3.zip"
+DESCRIPTION="Perl wrapper around Cutadapt and FastQC to adapter and quality trimming"
+HOMEPAGE="http://www.bioinformatics.babraham.ac.uk/projects/trim_galore"
+SRC_URI="http://www.bioinformatics.babraham.ac.uk/projects/trim_galore/trim_galore_v"${PV}".zip"
 
 LICENSE="GPL-3"
 SLOT="0"
@@ -15,6 +15,14 @@ IUSE=""
 
 DEPEND=""
 RDEPEND="
+	dev-lang/perl
 	sci-biology/cutadapt
 	sci-biology/fastqc
 	${DEPEND}"
+
+S="${WORKDIR}"/trim_galore_zip
+
+src_install(){
+	dobin trim_galore
+	dodoc *.pdf
+}