[gentoo-commits] repo/gentoo:master commit in: dev-python/scipy/

[Michał Górny]

commit:     3f76c06fc1e151b29f65d6cdafcfc4ee4f92d4b3
Author:     Michał Górny <mgorny <AT> gentoo <DOT> org>
AuthorDate: Thu Dec 23 22:44:34 2021 +0000
Commit:     Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Thu Dec 23 22:44:34 2021 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=3f76c06f

dev-python/scipy: Remove old

Signed-off-by: Michał Górny <mgorny <AT> gentoo.org>

 dev-python/scipy/Manifest           |   4 -
 dev-python/scipy/scipy-1.6.2.ebuild | 155 ------------------------------
 dev-python/scipy/scipy-1.7.2.ebuild | 185 ------------------------------------
 3 files changed, 344 deletions(-)

diff --git a/dev-python/scipy/Manifest b/dev-python/scipy/Manifest
index ab7dc2d11b63..88d145b73116 100644
--- a/dev-python/scipy/Manifest
+++ b/dev-python/scipy/Manifest
@@ -1,11 +1,7 @@
-DIST scipy-1.6.2.tar.gz 27187804 BLAKE2B af3578bc029c3af548c04144d7405ac8e6f8e057f870394e124f24aea9989120275407e5a7fdd29fbe1019d2acc295c1ce00872461ecf3a325000e8817cd559f SHA512 18b03f32e8343c5a6c6148ac0bfd4b5f2cc9ff5f74d5d41761ae9e773d6af8774c7b09a3fcc47122864eccce1dbbc17e9325819885d3fc3ab2baf98e7d3befa4
 DIST scipy-1.6.3.tar.gz 27187987 BLAKE2B 30f7171ca0dc0842f254472f4b52c0b0ad4389964a140cc4b94f9d85437c5a7da238c082be503242d433f1d3c65c3fd4afeb2f7831eea39ce303077406e718df SHA512 10ff25da84ce09ae231e781873902d8040d79868721d75a3f9facee177e7f46f7c9c34374feee6fe2253ddd968716d2993658ce514c4ac0c98d255c06a6ef808
 DIST scipy-1.7.1.tar.gz 36102628 BLAKE2B 67a414d863c61bf419fa907b9bed53b57beedc20d71d0630fac9719f02e951ea79b893d0803b385936a7c04a6c2f723d3870f0498f71e3c210ccd6ee75a009dc SHA512 81fea7e4f5fbcd537d662273507b6ac75bd4cf900567da8083ac86fb06d9f96b010d01a1697db53211440f0fdb2d89510313bafd3d383284d0ab9a08311dd102
-DIST scipy-1.7.2.tar.gz 36104529 BLAKE2B 8e31a71e8cd69a83e1b60747a01e34f79e42664089a2c41aa263c1697a689464fde0b467063e0ae3bafa37721294a79e21d0eedc6023c1558aea6e0105aefeae SHA512 87596430571ff2a43f067eaaf3254c0841dac82b9152cb64040f1a4d9bc5429aebc31c619ce55d74727f2a79567dfef4acbc6252c24c46d3c8849f97e6e8cfef
 DIST scipy-1.7.3.tar.gz 36102562 BLAKE2B 9a605a45d8f03aae3411a6fa92e32c7f6d10373455493ead847d4ad01429b55dbbc33c1a0309d6c9d76d3e9ab1a06772df59c08d393377896c4b534599f9eb9b SHA512 83fe00cf708a13a08d28af7022ec645d8976c177f2fefb56e0a47bfcbec726330b973d1f44364e23c939ae708e239a05904346f515ea1a37e8b70ad160b81cee
-DIST scipy-html-1.6.1.zip 23946591 BLAKE2B d3464c342b1d4f43e17e214c7557737913bf4131f88b9d569cff106c75dc7ebf0d065283792fddc189e2a3ddc322f1b2b4f38c6d313569f28395e79680060b58 SHA512 73561f9daa303c6e967f9b11952c6239dea7ff1a2fa02434354ac78fcffe7a552aa0f1043a17cb5c35a442def499eff199856cca8efa1415449cbf54f0d4913b
 DIST scipy-html-1.6.2.zip 23947380 BLAKE2B e4616a157c037b0830fc32d23678fb7e8ebe023d1fd9f0f762695a0d93bc56e432e441e675ec3c7a7d6586a665f6127ce49d570f1716876e58afb402761f8e95 SHA512 119a2227a808c752a751bc7bec6463da739c68391ebac8d2451998d90ebe03b2af401adbf987f0b694244e715c0ef1fd86c2f4a36c48dbb1ff7cdf4d914875df
 DIST scipy-html-1.7.1.zip 32435246 BLAKE2B fd8173da41aba95a14b1376f848bc668c4659bf1bbbdd0f87d926633d36f29c039957d38be145a5583010ebd83f6458090f75bdad773cc0f1591664e13c04c20 SHA512 ee59722878f6ef2d2319cdf4e6a60d3d1184f7c22752f9a8859eaa46fb677ebac9e8eef9c0826998e12bac9399e336799843341ef203224a82c9101347149672
-DIST scipy-ref-1.6.1.pdf 34594740 BLAKE2B 905ddcd7a3d462b09ded688f0818204d7684fa18058d0dac480d0a000e9ea0b7ebcdd33c01adae17234dcdf630d4aef9078174127af46f1db55d5c14b3245346 SHA512 355f4681439c1720f45dca6badfe72d77edfca0962fd9b42df34f1cd8fff7121fa6e7f60570bb638abd3ba9693930fa46b25af862d8fc1568b508c6fdd785479
 DIST scipy-ref-1.6.2.pdf 34599668 BLAKE2B 9ae3221c814eb0d1b1e9191e08000955af503f6448cf8b5841e400fad106c658670339219f4838bd312023601776fe0b0d123ebbd41460c478145da2ac3e9989 SHA512 9aecb7ca760805c470c41121268281c9547aef35ddf078816c5e48f7cf4912a67cf622e267152c6cc823df9d82be1f3a875d97469169d0d91d6219164c130c88
 DIST scipy-ref-1.7.1.pdf 33542025 BLAKE2B 6c978f06b770805f0fae06db740e8596658d98bbbc93c865127eae909957503bb38e02a9c97319aed07608718f8f373374b1cf3a8c3bd624aa3143f1d21bc428 SHA512 45720dc299594bac5c7539f950a0ff135b125d86bfe9847032cbff1f294601fefd0a1ac3fd7e3928b2702390c318ae2f8adca6403ba06ea1ded705fcff94ab79

diff --git a/dev-python/scipy/scipy-1.6.2.ebuild b/dev-python/scipy/scipy-1.6.2.ebuild
deleted file mode 100644
index 2092f8ee820d..000000000000
--- a/dev-python/scipy/scipy-1.6.2.ebuild
+++ /dev/null
@@ -1,155 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{7..9} )
-PYTHON_REQ_USE="threads(+)"
-
-inherit fortran-2 distutils-r1 flag-o-matic multiprocessing toolchain-funcs
-
-# upstream is slacking forever with doc updates
-DOC_PV=1.6.1
-DESCRIPTION="Scientific algorithms library for Python"
-HOMEPAGE="https://www.scipy.org/"
-SRC_URI="
-	mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz
-	doc? (
-		https://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-html-${DOC_PV}.zip
-		https://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-ref-${DOC_PV}.pdf
-	)"
-
-LICENSE="BSD LGPL-2"
-SLOT="0"
-KEYWORDS="amd64 ~arm ~arm64 ~ppc ppc64 x86 ~amd64-linux ~x86-linux ~ppc-macos"
-IUSE="doc sparse"
-
-DEPEND="
-	>=dev-python/numpy-1.16.5[lapack,${PYTHON_USEDEP}]
-	sci-libs/arpack:0=
-	virtual/cblas
-	virtual/lapack
-	sparse? ( sci-libs/umfpack:0= )"
-RDEPEND="${DEPEND}
-	dev-python/pillow[${PYTHON_USEDEP}]"
-BDEPEND="
-	dev-lang/swig
-	>=dev-python/cython-0.29.18[${PYTHON_USEDEP}]
-	dev-python/pybind11[${PYTHON_USEDEP}]
-	virtual/pkgconfig
-	doc? ( app-arch/unzip )
-	test? (
-		dev-python/nose[${PYTHON_USEDEP}]
-	)"
-
-DISTUTILS_IN_SOURCE_BUILD=1
-
-distutils_enable_tests pytest
-
-src_unpack() {
-	default
-	if use doc; then
-		unzip -qo "${DISTDIR}"/${PN}-html-${DOC_PV}.zip -d html || die
-	fi
-}
-
-pc_incdir() {
-	$(tc-getPKG_CONFIG) --cflags-only-I $@ | \
-		sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||'
-}
-
-pc_libdir() {
-	$(tc-getPKG_CONFIG) --libs-only-L $@ | \
-		sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||'
-}
-
-pc_libs() {
-	$(tc-getPKG_CONFIG) --libs-only-l $@ | \
-		sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \
-		-e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \
-		| tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||'
-}
-
-python_prepare_all() {
-	# scipy automatically detects libraries by default
-	export {FFTW,FFTW3,UMFPACK}=None
-	use sparse && unset UMFPACK
-	# the missing symbols are in -lpythonX.Y, but since the version can
-	# differ, we just introduce the same scaryness as on Linux/ELF
-	[[ ${CHOST} == *-darwin* ]] \
-		&& append-ldflags -bundle "-undefined dynamic_lookup" \
-		|| append-ldflags -shared
-	[[ -z ${FC}  ]] && export FC="$(tc-getFC)"
-	# hack to force F77 to be FC until bug #278772 is fixed
-	[[ -z ${F77} ]] && export F77="$(tc-getFC)"
-	export F90="${FC}"
-	export SCIPY_FCONFIG="config_fc --noopt --noarch"
-	append-fflags -fPIC
-
-	local libdir="${EPREFIX}"/usr/$(get_libdir)
-	cat >> site.cfg <<-EOF || die
-		[blas]
-		include_dirs = $(pc_incdir cblas)
-		library_dirs = $(pc_libdir cblas blas):${libdir}
-		blas_libs = $(pc_libs cblas blas)
-		[lapack]
-		library_dirs = $(pc_libdir lapack):${libdir}
-		lapack_libs = $(pc_libs lapack)
-	EOF
-	cat >> setup.cfg <<-EOF || die
-		[options]
-		zip_safe = False
-	EOF
-
-	# Drop hashes to force rebuild of cython based .c code
-	rm cythonize.dat || die
-
-	# TODO
-	sed -e "s:== 'levy_stable':in ('levy_stable', 'crystalball', 'ncf'):" \
-		-i scipy/stats/tests/test_continuous_basic.py || die
-
-	distutils-r1_python_prepare_all
-}
-
-python_configure_all() {
-	# bug 721860
-	test-flag-FC -fallow-argument-mismatch &&
-		append-fflags -fallow-argument-mismatch
-}
-
-python_compile() {
-	# FIXME: parallel python building fails, bug #614464
-	export MAKEOPTS=-j1
-
-	${EPYTHON} tools/cythonize.py || die
-	distutils-r1_python_compile \
-		${SCIPY_FCONFIG}
-}
-
-python_test() {
-	# fails with bdist_egg. should it be fixed in distutils-r1 eclass?
-	distutils_install_for_testing ${SCIPY_FCONFIG}
-	cd "${TEST_DIR}/lib" || die "no ${TEST_DIR} available"
-	PYTHONPATH=. "${EPYTHON}" -c "
-import scipy, sys
-r = scipy.test('fast', verbose=2)
-sys.exit(0 if r else 1)" || die "Tests fail with ${EPYTHON}"
-}
-
-python_install_all() {
-	use doc && \
-		local DOCS=( "${DISTDIR}"/${PN}-ref-${DOC_PV}.pdf ) \
-		local HTML_DOCS=( "${WORKDIR}"/html/. )
-	distutils-r1_python_install_all
-}
-
-python_install() {
-	distutils-r1_python_install ${SCIPY_FCONFIG}
-	python_optimize
-}
-
-pkg_postinst() {
-	elog "You might want to set the variable SCIPY_PIL_IMAGE_VIEWER"
-	elog "to your prefered image viewer. Example:"
-	elog "    echo \"export SCIPY_PIL_IMAGE_VIEWER=display\" >> ~/.bashrc"
-}

diff --git a/dev-python/scipy/scipy-1.7.2.ebuild b/dev-python/scipy/scipy-1.7.2.ebuild
deleted file mode 100644
index 7ddd70d6ffe1..000000000000
--- a/dev-python/scipy/scipy-1.7.2.ebuild
+++ /dev/null
@@ -1,185 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{8..10} )
-PYTHON_REQ_USE="threads(+)"
-
-inherit fortran-2 distutils-r1 flag-o-matic toolchain-funcs
-
-# upstream is slacking forever with doc updates
-DOC_PV=1.7.1
-DESCRIPTION="Scientific algorithms library for Python"
-HOMEPAGE="https://www.scipy.org/"
-SRC_URI="
-	mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz
-	doc? (
-		https://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-html-${DOC_PV}.zip
-		https://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-ref-${DOC_PV}.pdf
-	)"
-
-LICENSE="BSD LGPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~arm ~arm64 -hppa ~ia64 ~ppc64 ~riscv ~s390 ~sparc ~x86"
-IUSE="doc +pythran sparse"
-
-DEPEND="
-	>=dev-python/numpy-1.16.5[lapack,${PYTHON_USEDEP}]
-	sci-libs/arpack:0=
-	virtual/cblas
-	virtual/lapack
-	sparse? ( sci-libs/umfpack:0= )"
-RDEPEND="${DEPEND}
-	dev-python/pillow[${PYTHON_USEDEP}]"
-BDEPEND="
-	dev-lang/swig
-	>=dev-python/cython-0.29.18[${PYTHON_USEDEP}]
-	dev-python/pybind11[${PYTHON_USEDEP}]
-	virtual/pkgconfig
-	doc? ( app-arch/unzip )
-	pythran? ( dev-python/pythran[${PYTHON_USEDEP}] )
-	test? (
-		dev-python/nose[${PYTHON_USEDEP}]
-	)"
-
-DISTUTILS_IN_SOURCE_BUILD=1
-
-distutils_enable_tests pytest
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-1.7.1-pythran-tests-32-bit.patch
-)
-
-src_unpack() {
-	default
-	if use doc; then
-		unzip -qo "${DISTDIR}"/${PN}-html-${DOC_PV}.zip -d html || die
-	fi
-}
-
-pc_incdir() {
-	$(tc-getPKG_CONFIG) --cflags-only-I $@ | \
-		sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||'
-}
-
-pc_libdir() {
-	$(tc-getPKG_CONFIG) --libs-only-L $@ | \
-		sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||'
-}
-
-pc_libs() {
-	$(tc-getPKG_CONFIG) --libs-only-l $@ | \
-		sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \
-		-e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \
-		| tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||'
-}
-
-python_prepare_all() {
-	# scipy automatically detects libraries by default
-	export {FFTW,FFTW3,UMFPACK}=None
-	use sparse && unset UMFPACK
-	# the missing symbols are in -lpythonX.Y, but since the version can
-	# differ, we just introduce the same scaryness as on Linux/ELF
-	[[ ${CHOST} == *-darwin* ]] \
-		&& append-ldflags -bundle "-undefined dynamic_lookup" \
-		|| append-ldflags -shared
-	[[ -z ${FC}  ]] && export FC="$(tc-getFC)"
-	# hack to force F77 to be FC until bug #278772 is fixed
-	[[ -z ${F77} ]] && export F77="$(tc-getFC)"
-	export F90="${FC}"
-	export SCIPY_FCONFIG="config_fc --noopt --noarch"
-	append-fflags -fPIC
-
-	local libdir="${EPREFIX}"/usr/$(get_libdir)
-	cat >> site.cfg <<-EOF || die
-		[blas]
-		include_dirs = $(pc_incdir cblas)
-		library_dirs = $(pc_libdir cblas blas):${libdir}
-		blas_libs = $(pc_libs cblas blas)
-		[lapack]
-		library_dirs = $(pc_libdir lapack):${libdir}
-		lapack_libs = $(pc_libs lapack)
-	EOF
-	cat >> setup.cfg <<-EOF || die
-		[options]
-		zip_safe = False
-	EOF
-
-	# TODO
-	sed -e "s:== 'levy_stable':in ('levy_stable', 'crystalball', 'ncf'):" \
-		-i scipy/stats/tests/test_continuous_basic.py || die
-
-	# Skip known-failing test. Broken on all versions in Gentoo for years.
-	# bug #743295
-	sed -e 's:test_bisplev_integer_overflow:_&:' \
-			-i scipy/interpolate/tests/test_fitpack.py || die
-
-	# Skip a few 32-bit related failures
-	if use x86 ; then
-		# TODO: Tidy this up and switch to epytest
-		sed -i -e 's:test_nd_axis_m1:_&:' \
-			-e 's:test_nd_axis_0:_&:' \
-			-e 's:test_maxiter_worsening:_&:' \
-			-e 's:test_pdist_jensenshannon_iris:_&:' \
-			-e 's:test_align_vectors_single_vector:_&:' \
-			scipy/signal/tests/test_spectral.py \
-			scipy/sparse/linalg/isolve/tests/test_iterative.py \
-			scipy/spatial/tests/test_distance.py \
-			scipy/spatial/transform/tests/test_rotation.py || die
-	fi
-
-	if has_version ">=sci-libs/lapack-3.10"; then
-		sed -e 's:test_sort(:_&:' \
-			-i scipy/linalg/tests/test_decomp.py || die
-		sed -e 's:test_solve_discrete_are:_&:' \
-			-i scipy/linalg/tests/test_solvers.py || die
-	fi
-
-	distutils-r1_python_prepare_all
-}
-
-python_configure_all() {
-	export SCIPY_USE_PYTHRAN=$(usex pythran 1 0)
-
-	# bug 721860
-	test-flag-FC -fallow-argument-mismatch &&
-		append-fflags -fallow-argument-mismatch
-}
-
-python_compile() {
-	# FIXME: parallel python building fails, bug #614464
-	export MAKEOPTS=-j1
-
-	${EPYTHON} tools/cythonize.py || die
-	distutils-r1_python_compile \
-		${SCIPY_FCONFIG}
-}
-
-python_test() {
-	# fails with bdist_egg. should it be fixed in distutils-r1 eclass?
-	distutils_install_for_testing ${SCIPY_FCONFIG}
-	cd "${TEST_DIR}/lib" || die "no ${TEST_DIR} available"
-	PYTHONPATH=. "${EPYTHON}" -c "
-import scipy, sys
-r = scipy.test('fast', verbose=2)
-sys.exit(0 if r else 1)" || die "Tests fail with ${EPYTHON}"
-}
-
-python_install_all() {
-	use doc && \
-		local DOCS=( "${DISTDIR}"/${PN}-ref-${DOC_PV}.pdf ) \
-		local HTML_DOCS=( "${WORKDIR}"/html/. )
-	distutils-r1_python_install_all
-}
-
-python_install() {
-	distutils-r1_python_install ${SCIPY_FCONFIG}
-	python_optimize
-}
-
-pkg_postinst() {
-	elog "You might want to set the variable SCIPY_PIL_IMAGE_VIEWER"
-	elog "to your prefered image viewer. Example:"
-	elog "    echo \"export SCIPY_PIL_IMAGE_VIEWER=display\" >> ~/.bashrc"
-}