From: | "Justin Lecher (jlec)" <jlec@g.o> |
---|---|
To: | gentoo-commits@l.g.o |
Subject: | [gentoo-commits] gentoo-x86 commit in sci-biology/bamtools/files: bamtools-2.2.3-unbundle.patch |
Date: | Fri, 01 Mar 2013 08:16:24 |
Message-Id: | 20130301081621.7E1962171E@flycatcher.gentoo.org |
1 | jlec 13/03/01 08:16:21 |
2 | |
3 | Modified: bamtools-2.2.3-unbundle.patch |
4 | Log: |
5 | sci-biology/bamtools: Update script and correct dep on jsoncpp |
6 | |
7 | (Portage version: 2.2.0_alpha163/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) |
8 | |
9 | Revision Changes Path |
10 | 1.2 sci-biology/bamtools/files/bamtools-2.2.3-unbundle.patch |
11 | |
12 | file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bamtools/files/bamtools-2.2.3-unbundle.patch?rev=1.2&view=markup |
13 | plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bamtools/files/bamtools-2.2.3-unbundle.patch?rev=1.2&content-type=text/plain |
14 | diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bamtools/files/bamtools-2.2.3-unbundle.patch?r1=1.1&r2=1.2 |
15 | |
16 | Index: bamtools-2.2.3-unbundle.patch |
17 | =================================================================== |
18 | RCS file: /var/cvsroot/gentoo-x86/sci-biology/bamtools/files/bamtools-2.2.3-unbundle.patch,v |
19 | retrieving revision 1.1 |
20 | retrieving revision 1.2 |
21 | diff -u -r1.1 -r1.2 |
22 | --- bamtools-2.2.3-unbundle.patch 28 Jan 2013 08:35:06 -0000 1.1 |
23 | +++ bamtools-2.2.3-unbundle.patch 1 Mar 2013 08:16:21 -0000 1.2 |
24 | @@ -30,16 +30,3 @@ |
25 | |
26 | # export API headers |
27 | include(../ExportHeader.cmake) |
28 | -diff --git a/src/toolkit/bamtools_filter.cpp b/src/toolkit/bamtools_filter.cpp |
29 | -index 1189981..cf70199 100644 |
30 | ---- a/src/toolkit/bamtools_filter.cpp |
31 | -+++ b/src/toolkit/bamtools_filter.cpp |
32 | -@@ -16,7 +16,7 @@ |
33 | - #include <utils/bamtools_utilities.h> |
34 | - using namespace BamTools; |
35 | - |
36 | --#include <jsoncpp/json.h> |
37 | -+#include <json/json.h> |
38 | - using namespace Json; |
39 | - |
40 | - #include <cstdio> |