Get Gentoo!
gentoo.org sites
gentoo.org Wiki Bugs Forums Packages
Planet Archives Sources
Infra Status

Gentoo Archives: gentoo-commits

From: Martin Mokrejs <mmokrejs@×××××××××××××××.cz>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/ncbi-tools++/files/
Date: Thu, 26 Jun 2014 15:53:40
Message-Id: 1403797947.a9c97c981e04e280b2d1b21a54d178f680f0dba4.mmokrejs@gentoo
1 commit: a9c97c981e04e280b2d1b21a54d178f680f0dba4
2 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
3 AuthorDate: Thu Jun 26 15:52:27 2014 +0000
4 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
5 CommitDate: Thu Jun 26 15:52:27 2014 +0000
6 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=a9c97c98
7
8 sci-biology/ncbi-tools++-12.0.0: more entries to ncbi-tools++-12.0.0-drop-STATIC-from-LIB.patch
9
10 ---
11 .../ncbi-tools++-12.0.0-drop-STATIC-from-LIB.patch | 22 ++++++++++++++++++++++
12 1 file changed, 22 insertions(+)
13
14 diff --git a/sci-biology/ncbi-tools++/files/ncbi-tools++-12.0.0-drop-STATIC-from-LIB.patch b/sci-biology/ncbi-tools++/files/ncbi-tools++-12.0.0-drop-STATIC-from-LIB.patch
15 index 2b94208..44b16ae 100644
16 --- a/sci-biology/ncbi-tools++/files/ncbi-tools++-12.0.0-drop-STATIC-from-LIB.patch
17 +++ b/sci-biology/ncbi-tools++/files/ncbi-tools++-12.0.0-drop-STATIC-from-LIB.patch
18 @@ -19,4 +19,26 @@
19 + $(BLAST_LIBS:%=%$(STATIC)) $(OBJMGR_LIBS)
20
21 LIBS = $(PCRE_LIBS) $(CMPRS_LIBS) $(NETWORK_LIBS) $(DL_LIBS) $(ORIG_LIBS)
22 +
23 +--- ncbi_cxx--12_0_0/src/app/igblast/Makefile.igblastp.app.ori 2014-06-26 17:45:11.000000000 +0200
24 ++++ ncbi_cxx--12_0_0/src/app/igblast/Makefile.igblastp.app 2014-06-26 17:48:26.000000000 +0200
25 +@@ -3,7 +3,7 @@
26 + APP = igblastp
27 + SRC = igblastp_app
28 + LIB_ = $(BLAST_INPUT_LIBS) $(BLAST_LIBS) $(OBJMGR_LIBS)
29 +-LIB = blast_app_util igblast $(LIB_:%=%$(STATIC))
30 ++LIB = blast_app_util igblast $(LIB_)
31
32 + # De-universalize Mac builds to work around a PPC toolchain limitation
33 + CFLAGS = $(FAST_CFLAGS:ppc=i386)
34 +--- ncbi_cxx--12_0_0/src/app/igblast/Makefile.igblastn.app.ori 2014-06-26 17:47:53.000000000 +0200
35 ++++ ncbi_cxx--12_0_0/src/app/igblast/Makefile.igblastn.app 2014-06-26 17:49:31.000000000 +0200
36 +@@ -3,7 +3,7 @@
37 + APP = igblastn
38 + SRC = igblastn_app
39 + LIB_ = $(BLAST_INPUT_LIBS) xalgoalignutil xqueryparse $(BLAST_LIBS) $(OBJMGR_LIBS)
40 +-LIB = blast_app_util igblast $(LIB_:%=%$(STATIC))
41 ++LIB = blast_app_util igblast $(LIB_)
42 +
43 + # De-universalize Mac builds to work around a PPC toolchain limitation
44 + CFLAGS = $(FAST_CFLAGS:ppc=i386)
Report Message
Find on MARC Find on Google Groups