[gentoo-commits] proj/sci:ccp4 commit in: sci-chemistry/scala/, sci-chemistry/scala/files/

[Justin Lecher]

commit:     817044580a7ee9302bb2ba18a591f5a4470b9bf4
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sat Jun  1 15:19:25 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Jun  1 15:19:25 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=81704458

sci-chemistry/scala: Version Bump

Package-Manager: portage-2.2.0_alpha177

---
 sci-chemistry/scala/ChangeLog           | 89 +++++++++++++++++++++++++++++++++
 sci-chemistry/scala/files/Makefile.am   |  7 +++
 sci-chemistry/scala/files/configure.ac  | 14 ++++++
 sci-chemistry/scala/metadata.xml        | 13 +++++
 sci-chemistry/scala/scala-3.3.21.ebuild | 38 ++++++++++++++
 5 files changed, 161 insertions(+)

diff --git a/sci-chemistry/scala/ChangeLog b/sci-chemistry/scala/ChangeLog
new file mode 100644
index 0000000..a8fdbbf
--- /dev/null
+++ b/sci-chemistry/scala/ChangeLog
@@ -0,0 +1,89 @@
+# ChangeLog for sci-chemistry/scala
+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/scala/ChangeLog,v 1.20 2012/12/17 08:10:58 jlec Exp $
+
+*scala-3.3.21 (01 Jun 2013)
+
+  01 Jun 2013; Justin Lecher <jlec@g.o> +scala-3.3.21.ebuild,
+  +files/Makefile.am, +files/configure.ac, +metadata.xml:
+  Version Bump
+
+  17 Dec 2012; Justin Lecher <jlec@g.o> -scala-3.3.18-r2.ebuild,
+  metadata.xml:
+  Drop old
+
+  16 Dec 2012; Agostino Sarubbo <ago@g.o> scala-3.3.20.ebuild:
+  Stable for ppc, wrt bug #446742
+
+  14 Dec 2012; Agostino Sarubbo <ago@g.o> scala-3.3.20.ebuild:
+  Stable for x86, wrt bug #446742
+
+  14 Dec 2012; Agostino Sarubbo <ago@g.o> scala-3.3.20.ebuild:
+  Stable for amd64, wrt bug #446742
+
+  19 Oct 2012; Justin Lecher <jlec@g.o> scala-3.3.18-r2.ebuild,
+  scala-3.3.20.ebuild:
+  Remove virtual/fortran and always call fortran-2_pkg_setup as intend by the
+  updated fortran-2.eclass
+
+  07 Jun 2012; Justin Lecher <jlec@g.o> -scala-3.3.18-r1.ebuild,
+  metadata.xml:
+  Drop old
+
+  03 Jun 2012; Agostino Sarubbo <ago@g.o> scala-3.3.18-r2.ebuild:
+  Stable for amd64, wrt bug #418413
+
+  01 Jun 2012; Andreas Schuerch <nativemad@g.o> scala-3.3.18-r2.ebuild:
+  x86 stable, see bug 418413
+
+  04 May 2012; Jeff Horelick <jdhore@g.o> scala-3.3.18-r2.ebuild,
+  scala-3.3.20.ebuild:
+  dev-util/pkgconfig -> virtual/pkgconfig
+
+*scala-3.3.20 (27 Dec 2011)
+
+  27 Dec 2011; Justin Lecher <jlec@g.o> +scala-3.3.20.ebuild:
+  Version Bump
+
+  21 Jun 2011; Justin Lecher <jlec@g.o> scala-3.3.18-r1.ebuild,
+  scala-3.3.18-r2.ebuild:
+  Add dependency on virtual/fortran
+
+  21 Jun 2011; Justin Lecher <jlec@g.o> scala-3.3.18-r1.ebuild,
+  scala-3.3.18-r2.ebuild:
+  Added fortran-2.eclass support
+
+*scala-3.3.18-r2 (10 Apr 2011)
+
+  10 Apr 2011; Justin Lecher <jlec@g.o> +files/3.3.18-gcc4.6.patch,
+  +scala-3.3.18-r2.ebuild, files/Makefile.am, files/configure.ac:
+  Fix for compilation with gcc-4.6 (-fwhole-file), #362843; use pkg-config to
+  get lapack libs
+
+  18 Jan 2011; Thomas Kahle <tomka@g.o> scala-3.3.18-r1.ebuild:
+  x86 stable per bug 351756
+
+  16 Jan 2011; Kacper Kowalik <xarthisius@g.o>
+  scala-3.3.18-r1.ebuild:
+  marked ~ppc wrt #303931
+
+  15 Jan 2011; Markos Chandras <hwoarang@g.o> scala-3.3.18-r1.ebuild:
+  Stable on amd64 wrt bug #351756
+
+  16 Dec 2010; Justin Lecher <jlec@g.o> scala-3.3.18-r1.ebuild:
+  Removal of fortran.eclass, #348851
+
+  15 Jun 2010; Justin Lecher <jlec@g.o> scala-3.3.18-r1.ebuild:
+  keyworded for linux prefix
+
+*scala-3.3.18-r1 (15 Jun 2010)
+
+  15 Jun 2010; Justin Lecher <jlec@g.o> -scala-3.3.18.ebuild,
+  +scala-3.3.18-r1.ebuild:
+  Necessary bump
+
+*scala-3.3.18 (04 Feb 2010)
+
+  04 Feb 2010; Justin Lecher (jlec) <jlec@g.o> +scala-3.3.18.ebuild,
+  +files/Makefile.am, +files/configure.ac, +metadata.xml:
+  scala splitted of from ccp4

diff --git a/sci-chemistry/scala/files/Makefile.am b/sci-chemistry/scala/files/Makefile.am
new file mode 100644
index 0000000..49fd611
--- /dev/null
+++ b/sci-chemistry/scala/files/Makefile.am
@@ -0,0 +1,7 @@
+
+LIBS = -lccp4f $(LAPACK_LIBS)
+
+bin_PROGRAMS = scala
+
+scala_SOURCES = scala.f
+

diff --git a/sci-chemistry/scala/files/configure.ac b/sci-chemistry/scala/files/configure.ac
new file mode 100644
index 0000000..35c4c7f
--- /dev/null
+++ b/sci-chemistry/scala/files/configure.ac
@@ -0,0 +1,14 @@
+#                                               -*- Autoconf -*-
+# Process this file with autoconf to produce a configure script.
+
+AC_PREREQ(2.59)
+AC_INIT(scala, https://bugs.gentoo.org/)
+AC_CONFIG_SRCDIR([scala.f])
+AM_INIT_AUTOMAKE([foreign])
+
+PKG_CHECK_MODULES([LAPACK],[lapack])
+
+# Checks for programs.
+AC_PROG_FC
+AC_PROG_F77
+AC_OUTPUT([Makefile])

diff --git a/sci-chemistry/scala/metadata.xml b/sci-chemistry/scala/metadata.xml
new file mode 100644
index 0000000..2c9359a
--- /dev/null
+++ b/sci-chemistry/scala/metadata.xml
@@ -0,0 +1,13 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <herd>sci-chemistry</herd>
+  <maintainer>
+    <email>jlec@g.o</email>
+  </maintainer>
+  <longdescription>
+This program scales together multiple observations of reflections from
+Xray difraction experiments, and merges multiple observations into an 
+average intensity. 
+</longdescription>
+</pkgmetadata>

diff --git a/sci-chemistry/scala/scala-3.3.21.ebuild b/sci-chemistry/scala/scala-3.3.21.ebuild
new file mode 100644
index 0000000..d4c7d96
--- /dev/null
+++ b/sci-chemistry/scala/scala-3.3.21.ebuild
@@ -0,0 +1,38 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/scala/scala-3.3.20.ebuild,v 1.6 2012/12/16 19:52:13 ago Exp $
+
+EAPI=5
+
+AUTOTOOLS_AUTORECONF=true
+
+inherit autotools-utils fortran-2
+
+DESCRIPTION="Scale together multiple observations of reflections"
+HOMEPAGE="http://www.ccp4.ac.uk/dist/html/scala.html"
+SRC_URI="ftp://ftp.mrc-lmb.cam.ac.uk/pub/pre/${P}.tar.gz"
+
+LICENSE="ccp4"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE=""
+
+RDEPEND="
+	sci-libs/libccp4
+	virtual/lapack"
+DEPEND="${RDEPEND}
+	virtual/pkgconfig"
+
+src_prepare() {
+	cp "${FILESDIR}"/{configure.ac,Makefile.am} "${S}"
+	autotools-utils_src_prepare
+}
+
+src_install() {
+	dodoc ${PN}.doc
+	dohtml ${PN}.html
+	cd "${BUILD_DIR}"
+	exeinto /usr/libexec/ccp4/bin/
+	doexe ${PN}
+	dosym ../libexec/ccp4/bin/${PN} /usr/bin/${PN}
+}