[gentoo-commits] proj/sci:master commit in: sci-biology/jellyfish/

[Martin Mokrejs]

commit:     ca1d210fcb7805b9b0facbf1e6896d84e123f4cc
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Tue Mar 31 19:50:20 2015 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Tue Mar 31 19:50:20 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=ca1d210f

sci-biology/jellyfish: fix installation of header *.hpp files into /usr/include/jellyfish-2.1.3/jellyfish/ broken somewhere in upstream's code

Package-Manager: portage-2.2.18

 sci-biology/jellyfish/ChangeLog              | 5 +++++
 sci-biology/jellyfish/jellyfish-2.1.3.ebuild | 9 ++++++++-
 2 files changed, 13 insertions(+), 1 deletion(-)

diff --git a/sci-biology/jellyfish/ChangeLog b/sci-biology/jellyfish/ChangeLog
index cf2f8f7..5a84c98 100644
--- a/sci-biology/jellyfish/ChangeLog
+++ b/sci-biology/jellyfish/ChangeLog
@@ -2,6 +2,11 @@
 # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  31 Mar 2015; Martin Mokrejs <mmokrejs@×××××××××××××××.cz>
+  jellyfish-2.1.3.ebuild:
+  sci-biology/jellyfish: fix installation of header *.hpp files into
+  /usr/include/jellyfish-2.1.3/jellyfish/ broken somewhere in upstream's code
+
   07 Jan 2015; Martin Mokrejs <mmokrejs@×××××××××××××××.cz>
   jellyfish-2.1.3.ebuild:
   added a comment on old version

diff --git a/sci-biology/jellyfish/jellyfish-2.1.3.ebuild b/sci-biology/jellyfish/jellyfish-2.1.3.ebuild
index 51f683c..cceca4b 100644
--- a/sci-biology/jellyfish/jellyfish-2.1.3.ebuild
+++ b/sci-biology/jellyfish/jellyfish-2.1.3.ebuild
@@ -4,7 +4,7 @@
 
 EAPI=5
 
-DESCRIPTION="k-mer counter withing reads for assemblies"
+DESCRIPTION="k-mer counter within reads for assemblies"
 HOMEPAGE="http://www.genome.umd.edu/jellyfish.html"
 SRC_URI="ftp://ftp.genome.umd.edu/pub/jellyfish/jellyfish-2.1.3.tar.gz
 	ftp://ftp.genome.umd.edu/pub/jellyfish/JellyfishUserGuide.pdf"
@@ -18,3 +18,10 @@ IUSE=""
 
 DEPEND=""
 RDEPEND="${DEPEND}"
+
+src_install(){
+	default
+	mkdir -p ${D}/usr/include/${PN} || die
+	mv ${D}/usr/include/${P}/${PN}/* ${D}/usr/include/${PN}/ || die
+	rm -rf ${D}/usr/include/${P}
+}