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commit: edf2691cf2c7787a766dbd1a8b1083448f693a9d |
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Author: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org> |
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AuthorDate: Tue Aug 31 09:21:53 2021 +0000 |
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Commit: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org> |
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CommitDate: Tue Aug 31 09:21:53 2021 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=edf2691c |
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|
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sci-biology/Scaffolder-evaluation: remove last-rited pack |
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|
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Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org> |
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|
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.../Scaffolder-evaluation-9999.ebuild | 38 ---------------------- |
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sci-biology/Scaffolder-evaluation/metadata.xml | 15 --------- |
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2 files changed, 53 deletions(-) |
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|
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diff --git a/sci-biology/Scaffolder-evaluation/Scaffolder-evaluation-9999.ebuild b/sci-biology/Scaffolder-evaluation/Scaffolder-evaluation-9999.ebuild |
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deleted file mode 100644 |
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index 4e291ece2..000000000 |
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--- a/sci-biology/Scaffolder-evaluation/Scaffolder-evaluation-9999.ebuild |
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+++ /dev/null |
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@@ -1,38 +0,0 @@ |
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-# Copyright 1999-2021 Gentoo Authors |
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-# Distributed under the terms of the GNU General Public License v2 |
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- |
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-EAPI=7 |
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- |
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-PYTHON_COMPAT=( python3_{7,8,9} ) |
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- |
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-inherit python-r1 perl-functions git-r3 |
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- |
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-DESCRIPTION="Scripts to run genome assembly scaffolding tools and analyse output for accuracy" |
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-HOMEPAGE="https://github.com/martinghunt/Scaffolder-evaluation |
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- https://genomebiology.biomedcentral.com/articles/10.1186/gb-2014-15-3-r42" |
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-EGIT_REPO_URI="https://github.com/martinghunt/Scaffolder-evaluation.git" |
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- |
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-LICENSE="GPL-3" |
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-SLOT="0" |
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-KEYWORDS="" |
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- |
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-REQUIRED_USE="${PYTHON_REQUIRED_USE}" |
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- |
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-DEPEND="${PYTHON_DEPS}" |
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-RDEPEND="${DEPEND} |
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- dev-lang/perl |
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- dev-lang/R |
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- media-gfx/graphviz |
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- sci-biology/mummer |
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- sci-biology/bowtie |
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- sci-biology/samtools |
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- sci-biology/ncbi-tools |
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- sci-biology/Fastaq[${PYTHON_USEDEP}] |
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-" |
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- |
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-src_install(){ |
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- python_foreach_impl python_doscript Analysis-scripts/*.py |
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- dobin Analysis-scripts/*.sh |
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- perl_domodule Wrapper-scripts/* |
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- dodoc README.md |
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-} |
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|
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diff --git a/sci-biology/Scaffolder-evaluation/metadata.xml b/sci-biology/Scaffolder-evaluation/metadata.xml |
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deleted file mode 100644 |
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index 337db209e..000000000 |
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--- a/sci-biology/Scaffolder-evaluation/metadata.xml |
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+++ /dev/null |
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@@ -1,15 +0,0 @@ |
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-<?xml version="1.0" encoding="UTF-8"?> |
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-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
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-<pkgmetadata> |
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- <maintainer type="person"> |
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- <email>mmokrejs@×××××××××××××××.cz</email> |
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- <name>Martin Mokrejs</name> |
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- </maintainer> |
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- <maintainer type="project"> |
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- <email>sci-biology@g.o</email> |
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- <name>Gentoo Biology Project</name> |
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- </maintainer> |
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- <upstream> |
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- <remote-id type="github">martinghunt/Scaffolder-evaluation</remote-id> |
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- </upstream> |
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-</pkgmetadata> |
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